RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TDHQ8IZJ6 230 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 OR52I2Q8NH67 350 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 OXGR1Q96P68 337 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 DCBLD2Q96PD2 775 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 FOXD3Q9UJU5 478 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 EPDR1Q9UM22 224 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 VDAC3Q9Y277 283 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 BCL2P10415 239 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TAF10Q12962 218 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 GPR135Q8IZ08 494 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ABHD17AQ96GS6 310 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 CYSLTR2Q9NS75 346 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 GREB1LQ9C091 1923 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 C9orf172C9J069 976 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 PYCARD-AS1I3L0S3 204 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 INSL5Q9Y5Q6 135 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRIOBPQ9H2D6 2365 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 COL2A1P02458 1487 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 E5RJQ4 531 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRIAP1O43715 76 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 IGHG2P01859 326 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 FKBP2P26885 142 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 GDF10P55107 478 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 UCP3P55916 312 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 CDCP2Q5VXM1 449 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 OR52I1Q8NGK6 324 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLC25A39Q9BZJ4 359 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ECM29Q5VYK3 1845 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 A0A1B0GU03 582 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SMIM10L2AP0DMW4 78 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SMIM10L2BP0DMW5 78 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 HIST1H4AP62805 103 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 CXorf66Q5JRM2 361 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SH2D5Q6ZV89 423 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 LRRC75A-AS1Q8N1F1 130 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TP53I13Q8NBR0 393 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 PP6455Q8WZ26 134 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 MRPL18Q9H0U6 180 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 COL22A1Q8NFW1 1626 aaPredicted RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 CTXND1A0A1B0GTU2 59 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 CEACAM6P40199 344 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 PTGDSP41222 190 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TSKUQ8WUA8 353 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TIMM23O14925 209 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 TYROBPO43914 113 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SRD5A2P31213 254 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 DAD1P61803 113 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM155Q4W5P6 130 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 C19orf54Q5BKX5 351 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SIRT6Q8N6T7 355 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 ST6GALNAC3Q8NDV1 305 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 AQP3Q92482 292 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PXMP4Q9Y6I8 212 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 KCPQ6ZWJ8 1503 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 NDUFS6O75380 124 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CFDP00746 253 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CTLA4P16410 223 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SIRPAP78324 504 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 POU3F1Q03052 451 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PHLDA2Q53GA4 152 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 LINC00305Q7Z4B0 112 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 NOXO1Q8NFA2 376 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLC25A40Q8TBP6 338 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 TXNRD2Q9NNW7 524 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 RGPD1P0DJD0 1748 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 WDR25Q64LD2 544 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 EAF1Q96JC9 268 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PITX3O75364 302 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CXCL10P02778 98 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SRP19P09132 144 aaKnown RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 FOXB2Q5VYV0 432 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CCDC144NLQ6NUI1 221 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 MOB3CQ70IA8 216 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 OR10AC1Q8NH08 325 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 NAT6Q93015 286 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 INSIG2Q9Y5U4 225 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 K7EP13 123 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SNHG28P0DPA3 235 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 MUC1P15941 1255 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CD38P28907 300 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 FOXK2Q01167 660 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM215Q68D42 235 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 LILRA6Q6PI73 481 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM207Q6UWW9 146 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 RIMKLAQ8IXN7 391 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 KIR2DS5A0A0G2JLQ3 304 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 A0A0G2JNG1 304 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 M0R2P5 195 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 CEACAM4O75871 244 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 MPC1LP0DKB6 136 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 OPRM1P35372 400 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 ID4P47928 161 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 KIR2DS5Q14953 304 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PDGFRLQ15198 375 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 SCD5Q86SK9 330 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PRSS16Q9NQE7 514 aa5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 COLQQ9Y215 455 aaPredicted RBP5.32□□□□□ -1.56
CDC42BPA-201ENST00000334218 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.32□□□□□ -1.563e-11■■■□□ 16.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms