RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 NDUFAF3Q9BU61 184 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 SIT1Q9Y3P8 196 aa20.01■□□□□ 0.79
TSKU-201ENST00000333090 TRBV6-6A0A0A6YYG2 114 aa20■□□□□ 0.79
TSKU-201ENST00000333090 GDF1P27539 372 aa20■□□□□ 0.79
TSKU-201ENST00000333090 IL11RAQ14626 422 aa20■□□□□ 0.79
TSKU-201ENST00000333090 ACSM6Q6P461 480 aa20■□□□□ 0.79
TSKU-201ENST00000333090 OR2Y1Q8NGV0 311 aa20■□□□□ 0.79
TSKU-201ENST00000333090 OR51I2Q9H344 312 aa20■□□□□ 0.79
TSKU-201ENST00000333090 ZNF503-AS2A6NEH8 195 aa20■□□□□ 0.79
TSKU-201ENST00000333090 DEGS1O15121 323 aa20■□□□□ 0.79
TSKU-201ENST00000333090 LILRA1O75019 489 aa20■□□□□ 0.79
TSKU-201ENST00000333090 HRASP01112 189 aa20■□□□□ 0.79
TSKU-201ENST00000333090 NUBP1P53384 320 aa20■□□□□ 0.79
TSKU-201ENST00000333090 FAM3BP58499 235 aaPredicted RBP20■□□□□ 0.79
TSKU-201ENST00000333090 MAFAQ8NHW3 353 aaPredicted RBP20■□□□□ 0.79
TSKU-201ENST00000333090 SAP25Q8TEE9 199 aa20■□□□□ 0.79
TSKU-201ENST00000333090 LIN7CQ9NUP9 197 aaKnown RBP20■□□□□ 0.79
TSKU-201ENST00000333090 IL18BPO95998 194 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 SRYQ05066 204 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 PMS2P11Q13670 270 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 IGFBP7Q16270 282 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 OR51B6Q9H340 312 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 LRP5LA4QPB2 252 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 TMEM250H0YL14 139 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 ZNF124Q15973 351 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 OR5T1Q8NG75 326 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 TMEM170AQ8WVE7 144 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 DOCK7Q96N67 2140 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 DDA1Q9BW61 102 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 TP53TG5Q9Y2B4 290 aa19.99■□□□□ 0.79
TSKU-201ENST00000333090 GCGP01275 180 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 LINC00596Q86U02 117 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 ACY3Q96HD9 319 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 DEPPQ9NTK1 212 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 ESPL1Q14674 2120 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 RHBDL1O75783 438 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 PRSS8Q16651 343 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 OR5P3Q8WZ94 311 aa19.98■□□□□ 0.79
TSKU-201ENST00000333090 FGFRL1Q8N441 504 aa19.97■□□□□ 0.79
TSKU-201ENST00000333090 PARD6GQ9BYG4 376 aaPredicted RBP19.97■□□□□ 0.79
TSKU-201ENST00000333090 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.97■□□□□ 0.79
TSKU-201ENST00000333090 NRN1LQ496H8 165 aa19.97■□□□□ 0.79
TSKU-201ENST00000333090 MRPL41Q8IXM3 137 aaKnown RBP19.97■□□□□ 0.79
TSKU-201ENST00000333090 FOLR3P41439 243 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 GNB2P62879 340 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 SLC10A1Q14973 349 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 CENPVQ7Z7K6 275 aaPredicted RBP19.96■□□□□ 0.79
TSKU-201ENST00000333090 ZNF573Q86YE8 665 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 OR10G9Q8NGN4 311 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 OR10G7Q8NGN6 311 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 OR2T10Q8NGZ9 312 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 DOCK11Q5JSL3 2073 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 WNT2P09544 360 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 CEACAM6P40199 344 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 TMEM14EPQ6UXP3 125 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 IFI44Q8TCB0 444 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 TRAPPC2LQ9UL33 140 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 WASF3Q9UPY6 502 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 CTXND1A0A1B0GTU2 59 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 ANKRD30BLA7E2S9 258 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 SIRPB1O00241 398 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 GYPAP02724 150 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 PMP22Q01453 160 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 TMEM18Q96B42 140 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 WFIKKN1Q96NZ8 548 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 PLA2G3Q9NZ20 509 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 TIMM9Q9Y5J7 89 aa19.96■□□□□ 0.79
TSKU-201ENST00000333090 PINLYPA6NC86 204 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 HOXA6P31267 233 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 PDLIM4P50479 330 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 SPCS3P61009 180 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 RPS16P62249 146 aaKnown RBP19.95■□□□□ 0.78
TSKU-201ENST00000333090 TNFRSF9Q07011 255 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 ACTL10Q5JWF8 245 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 TMEM45BQ96B21 275 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 R4GN57 208 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 TNRC6AQ8NDV7 1962 aaKnown RBP19.95■□□□□ 0.78
TSKU-201ENST00000333090 TCAPO15273 167 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 DEFA4P12838 97 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 GNG3P63215 75 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 TUSC5Q8IXB3 177 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 DRAM1Q8N682 238 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 STRADBQ9C0K7 418 aa19.95■□□□□ 0.78
TSKU-201ENST00000333090 NPIPB11E5RHQ5 1161 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 EREGO14944 169 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 PAGE4O60829 102 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 OR4A8P0C604 315 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 OTX2P32243 289 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 BEND2Q8NDZ0 799 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 ANAPC16Q96DE5 110 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 B4E171 279 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 TSPAN7P41732 249 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 FFAR4Q5NUL3 377 aa19.94■□□□□ 0.78
TSKU-201ENST00000333090 TNRC6BQ9UPQ9 1833 aaKnown RBP19.93■□□□□ 0.78
TSKU-201ENST00000333090 KRASP01116 189 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 CA6P23280 308 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 CHRNA7P36544 502 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 GFRA1P56159 465 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 Q0VFX4 171 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 ACOT6Q3I5F7 207 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms