RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SLC25A6P12236 298 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 EPHA1P21709 976 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 CXorf66Q5JRM2 361 aaPredicted RBP12.4□□□□□ -0.42
TPM3-205ENST00000328159 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 RNASE11Q8TAA1 199 aaKnown RBP12.4□□□□□ -0.42
TPM3-205ENST00000328159 EDARADDQ8WWZ3 215 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 LSM10Q969L4 123 aaKnown RBP12.4□□□□□ -0.42
TPM3-205ENST00000328159 CXorf58Q96LI9 332 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 C11orf1Q9H5F2 150 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
TPM3-205ENST00000328159 GNG12Q9UBI6 72 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 FBXL17Q9UF56 701 aa12.4□□□□□ -0.42
TPM3-205ENST00000328159 DIDO1Q9BTC0 2240 aaKnown RBP12.4□□□□□ -0.42
TPM3-205ENST00000328159 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 TMEM178BH3BS89 294 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 ST8SIA5O15466 376 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 YPEL1O60688 119 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 LPAR6P43657 344 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 TMEM33P57088 247 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 LOXL3P58215 753 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 POLR2GP62487 172 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM3-205ENST00000328159 RPL30P62888 115 aaKnown RBP12.39□□□□□ -0.43
TPM3-205ENST00000328159 ID3Q02535 119 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 CATR1Q13166 79 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 MORN2Q502X0 79 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 FAM216AQ8WUB2 273 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 TMEM106BQ9NUM4 274 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
TPM3-205ENST00000328159 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 TRGV10A0A0A0MS01 117 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 MED19A0JLT2 244 aaPredicted RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 PITX3O75364 302 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 IGKV1-5P01602 117 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 EIF5AP63241 154 aaKnown RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 C17orf58Q2M2W7 97 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 BTNL3Q6UXE8 466 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 MAGT1Q9H0U3 335 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 SDHAF2Q9NX18 166 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 PPIAL4AQ9Y536 164 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 USF3Q68DE3 2245 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 AKR1C2P52895 323 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 Q3ZCU0 254 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 ZNF66Q6ZN08 573 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 CCL17Q92583 94 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 BSCL2Q96G97 398 aaPredicted RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
TPM3-205ENST00000328159 ANKHD1Q8IWZ3 2542 aaKnown RBP12.38□□□□□ -0.43
TPM3-205ENST00000328159 KBTBD11-OT1A0A1B0GTJ5 212 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 TMPRSS2O15393 492 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 ZZEF1O43149 2961 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 SSSCA1O60232 199 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 CLDN1O95832 211 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 GAPDHP04406 335 aaKnown RBP12.37□□□□□ -0.43
TPM3-205ENST00000328159 MMP9P14780 707 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 OMGP23515 440 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 GPR12P47775 334 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 VAMP2P63027 116 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 IZUMO4Q1ZYL8 232 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 CLEC9AQ6UXN8 241 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 TCF23Q7RTU1 214 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
TPM3-205ENST00000328159 CLN8Q9UBY8 286 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 PFDN2Q9UHV9 154 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 HCFC1P51610 2035 aa12.37□□□□□ -0.43
TPM3-205ENST00000328159 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 CLDN14O95500 239 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
TPM3-205ENST00000328159 TFF3Q07654 80 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 AANATQ16613 207 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 SWI5Q1ZZU3 235 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 ZNF672Q499Z4 452 aaPredicted RBP12.36□□□□□ -0.43
TPM3-205ENST00000328159 OR2B11Q5JQS5 317 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 Q6ZRM9 215 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 FGFRL1Q8N441 504 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 OR2C3Q8N628 320 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 TCTEX1D1Q8N7M0 179 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 TMED6Q8WW62 240 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 CORO2AQ92828 525 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 FAM212BQ9NTI7 297 aaPredicted RBP12.36□□□□□ -0.43
TPM3-205ENST00000328159 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
TPM3-205ENST00000328159 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 ZNF729A6NN14 1252 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 KIAA1324LA8MWY0 1029 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 WRBO00258 174 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 RAMP3O60896 148 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 JTBO76095 146 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 NXPH3O95157 252 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 NDUFB7P17568 137 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 ZNF816Q0VGE8 651 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 SPAG16Q8N0X2 631 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 MUC15Q8N387 334 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms