RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 S100A13Q99584 98 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 NLKQ9UBE8 527 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 SCP2D1Q9UJQ7 156 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 POLDIP2Q9Y2S7 368 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 PRELID3BQ9Y3B1 194 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 MYCBP2O75592 4640 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 MEIKINA0A087WXM9 373 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 A0A096LPE4 126 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 IGKV1-12A0A0C4DH73 117 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 A0A1W2PPZ6 126 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 PDCD6O75340 191 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 OR2A4O95047 310 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 NAPSAO96009 420 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 IGKV1D-12P01611 117 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 PATE4P0C8F1 98 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 C9orf135Q5VTT2 229 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 PLCXD3Q63HM9 321 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 TEX261Q6UWH6 196 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 DHRS11Q6UWP2 260 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 COMMD7Q86VX2 200 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 LRP11Q86VZ4 500 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 POC1AQ8NBT0 407 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF680Q8NEM1 530 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 CCDC107Q8WV48 283 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 CCL17Q92583 94 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 NEIL1Q96FI4 390 aaPredicted RBP5.3□□□□□ -1.56
CSTF3-201ENST00000323959 OR2A7Q96R45 310 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 MICU1Q9BPX6 476 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 GPN1Q9HCN4 374 aaPredicted RBP5.3□□□□□ -1.56
CSTF3-201ENST00000323959 U3KQ87 197 aa5.3□□□□□ -1.56
CSTF3-201ENST00000323959 PRSS29PA6NIE9 313 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF736B4DX44 427 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 IFNA7P01567 189 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 PGA5P0DJD9 388 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 FUT3P21217 361 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 SRP9P49458 86 aaKnown RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 HOXA1P49639 335 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 FLI1Q01543 452 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF273Q14593 569 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 RSU1Q15404 277 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 TMEM255AQ5JRV8 349 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF660Q6AZW8 331 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 MOB3CQ70IA8 216 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 MOB1BQ7L9L4 216 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 TRAPPC6BQ86SZ2 158 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 SLC25A42Q86VD7 318 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 CHST4Q8NCG5 386 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 Q8TCH9 128 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 GPER1Q99527 375 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 KLK5Q9Y337 293 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 PIGBOS1A0A0B4J2F0 54 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF850A8MQ14 1090 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 CRTAPO75718 401 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 RAB3DO95716 219 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 FCER2P06734 321 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 RRASP10301 218 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 KLF3P57682 345 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 RAB14P61106 215 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF718Q3SXZ3 478 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 C9orf62Q8N4C0 152 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 OR5AP2Q8NGF4 316 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 KLF14Q8TD94 323 aaPredicted RBP5.29□□□□□ -1.56
CSTF3-201ENST00000323959 HIST1H2AAQ96QV6 131 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 NRIP2Q9BQI9 281 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 NICN1Q9BSH3 213 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 PCGF1Q9BSM1 259 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 OR51J1Q9H342 316 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 ING4Q9UNL4 249 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 VPS13DQ5THJ4 4388 aa5.29□□□□□ -1.56
CSTF3-201ENST00000323959 SOCS1O15524 211 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CSN2P05814 226 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CTXN2P0C2S0 81 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 ZP3P21754 424 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 THBS3P49746 956 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 MYPOPQ86VE0 399 aaPredicted RBP5.28□□□□□ -1.56
CSTF3-201ENST00000323959 ZNF575Q86XF7 245 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 LILRB2Q8N423 598 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 OR13C8Q8NGS7 320 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 MRGPRFQ96AM1 343 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 ARHGAP5-AS1Q96IT6 56 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CABLES2Q9BTV7 478 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 TMEM235A6NFC5 223 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 DBX1A6NMT0 343 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 MT-ND4P03905 459 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CSTBP04080 98 aaKnown RBP5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CD3DP04234 171 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 GIPP09681 153 aaPredicted RBP5.28□□□□□ -1.56
CSTF3-201ENST00000323959 RPS2P15880 293 aaKnown RBP5.28□□□□□ -1.56
CSTF3-201ENST00000323959 PSG7Q13046 419 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 BTN1A1Q13410 526 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 RBM39Q14498 530 aaKnown RBP5.28□□□□□ -1.56
CSTF3-201ENST00000323959 LY6G6FQ5SQ64 297 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 Q6P435 159 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 TMEM17Q86X19 198 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 CALHM1Q8IU99 346 aa5.28□□□□□ -1.56
CSTF3-201ENST00000323959 OR10AD1Q8NGE0 317 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms