RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 GDF9O60383 454 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TUSC2O75896 110 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CCL3P10147 92 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 HOXA6P31267 233 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CDKN1AP38936 164 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM42Q69YG0 159 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 RHBDD2Q6NTF9 364 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KCNIP4Q6PIL6 250 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DL5AQ8N109 375 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 PSMG3Q9BT73 122 aaPredicted RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DS1A0A191URI9 304 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TCF21O43680 179 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 SYNGR1O43759 233 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 NAPSAO96009 420 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 NPPCP23582 126 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DS4P43632 304 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TFF3Q07654 80 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TRA2AQ13595 282 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 KIR2DS1Q14954 304 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 FFAR4Q5NUL3 377 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CISD2Q8N5K1 135 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CMTM2Q8TAZ6 248 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 DTD1Q8TEA8 209 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 OR5P3Q8WZ94 311 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CLDN23Q96B33 292 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 LPAR2Q9HBW0 351 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CHCHD2Q9Y6H1 151 aaPredicted RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 COL6A3P12111 3177 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 DUXBA0A1W2PPF3 345 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 C11orf94C9JXX5 98 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 SCRG1O75711 98 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 ADMP35318 185 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 HNRNPKP61978 463 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■■■□□ 16
PTPRA-202ENST00000318266 PPP1CBP62140 327 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 PCSK4Q6UW60 755 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 Q6ZSR3 168 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 YRDCQ86U90 279 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF114Q8NC26 417 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 SGMS2Q8NHU3 365 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 ZCCHC14Q8WYQ9 949 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 FAM103A1Q9BTL3 118 aaKnown RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 FGF23Q9GZV9 251 aaPredicted RBP8.2□□□□□ -1.1
PTPRA-202ENST00000318266 WNT5BQ9H1J7 359 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM38BQ9NVV0 291 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 MTCH1Q9NZJ7 389 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 CLN8Q9UBY8 286 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 OR2W1Q9Y3N9 320 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 ATP23Q9Y6H3 246 aa8.2□□□□□ -1.1
PTPRA-202ENST00000318266 A0A096LPE4 126 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 A0A1W2PPZ6 126 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 NDUFB4O95168 129 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 KRASP01116 189 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 THBS3P49746 956 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 PRDX4Q13162 271 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 GCSAMLQ5JQS6 135 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM105Q8N8V8 129 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 PSMF1Q92530 271 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 HSPB9Q9BQS6 159 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 AGMATQ9BSE5 352 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 ZDHHC11Q9H8X9 412 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 IL36GQ9NZH8 169 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 RBMXL2O75526 392 aaKnown RBP8.19□□□□□ -1.1
PTPRA-202ENST00000318266 CBLN1P23435 193 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 ATP5G3P48201 142 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 Q6ZWC4 215 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 AAED1Q7RTV5 226 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF573Q86YE8 665 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 TSTD1Q8NFU3 115 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 NEIL1Q96FI4 390 aaPredicted RBP8.19□□□□□ -1.1
PTPRA-202ENST00000318266 FOXB1Q99853 325 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 CHRNA10Q9GZZ6 450 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 EXPH5Q8NEV8 1989 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 FREM1Q5H8C1 2179 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 USF3Q68DE3 2245 aa8.19□□□□□ -1.1
PTPRA-202ENST00000318266 LOC102725191A0A1B0GVB3 256 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM250H0YL14 139 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TRAPPC2LH3BP13 241 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 PPP1R14DQ9NXH3 145 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 IGLV3-32A0A0A0MS00 114 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 IGHV1OR15-9A0A0B4J2B8 117 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 OR6C6A6NF89 314 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 F2Z2F3 143 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 COL8A2P25067 703 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 BRS3P32247 399 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 FOXL2NBQ6ZUU3 175 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 C17orf82Q86X59 251 aaPredicted RBP8.18□□□□□ -1.1
PTPRA-202ENST00000318266 FADS6Q8N9I5 356 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 CPEB3Q8NE35 698 aaKnown RBP8.18□□□□□ -1.1
PTPRA-202ENST00000318266 OR2J1Q9GZK6 312 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 RYDENQ9NUL5 291 aaKnown RBP8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TRAV38-1A0A0B4J264 116 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 CTXND1A0A1B0GTU2 59 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TP53I11O14683 189 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 SIAH2O43255 324 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 CXCL13O43927 109 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms