RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 DIDO1Q9BTC0 2240 aaKnown RBP16.49■□□□□ 0.23
ZNF554-201ENST00000317243 A0A1W2PR80 420 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 CEACAM1P13688 526 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 GPM6AP51674 278 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 RBM11P57052 281 aaKnown RBP16.49■□□□□ 0.23
ZNF554-201ENST00000317243 RNFT1Q5M7Z0 435 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 ZNF488Q96MN9 340 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 ATP5SQ99766 215 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 SPIN2AQ99865 258 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 SPIN2BQ9BPZ2 258 aa16.49■□□□□ 0.23
ZNF554-201ENST00000317243 OPN3Q9H1Y3 402 aaPredicted RBP16.49■□□□□ 0.23
ZNF554-201ENST00000317243 PMP22Q01453 160 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 ZNF726P1Q15940 193 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 OR51G1Q8NGK1 321 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 SMIM7Q9BQ49 75 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 FKBP11Q9NYL4 201 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 DMXL2Q8TDJ6 3036 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 TRAV1-1A0A0B4J248 108 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 WNT5AP41221 380 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 GALR1P47211 349 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 OR3A1P47881 315 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 GTF3C1Q12789 2109 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 C1orf194Q5T5A4 169 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.48■□□□□ 0.23
ZNF554-201ENST00000317243 EXTL1Q92935 676 aa16.48■□□□□ 0.23
ZNF554-201ENST00000317243 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
ZNF554-201ENST00000317243 IGKV1D-13A0A0B4J2D9 117 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 METTL15P1P0C7V9 234 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 IGKV1-13P0DP09 117 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 PDLIM4P50479 330 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 SRPXP78539 464 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 IZUMO4Q1ZYL8 232 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 RIPPLY2Q5TAB7 128 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 NEK7Q8TDX7 302 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 ACY3Q96HD9 319 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 PYGO2Q9BRQ0 406 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 CCL28Q9NRJ3 127 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 RP1L1Q8IWN7 2480 aaPredicted RBP16.47■□□□□ 0.23
ZNF554-201ENST00000317243 KMT2EQ8IZD2 1858 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM210A6NLX4 147 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 RPLP1P05386 114 aaKnown RBP16.47■□□□□ 0.23
ZNF554-201ENST00000317243 BCL3P20749 454 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 PLA2G5P39877 138 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 FUT6P51993 359 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 SPATA46Q5T0L3 261 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM211Q6ICI0 200 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM170AQ8WVE7 144 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 RBKSQ9H477 322 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 MEOX1P50221 254 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM267Q0VDI3 215 aaPredicted RBP16.47■□□□□ 0.23
ZNF554-201ENST00000317243 OR8B8Q15620 311 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 PLA2G2CQ5R387 149 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 DPPA3Q6W0C5 159 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 ASCL4Q6XD76 172 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM56Q96MV1 263 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 ZNF552Q9H707 407 aaPredicted RBP16.47■□□□□ 0.23
ZNF554-201ENST00000317243 TMEM56-RWDD3S4R434 201 aa16.47■□□□□ 0.23
ZNF554-201ENST00000317243 A0A1B0GUS0 222 aa16.46■□□□□ 0.23
ZNF554-201ENST00000317243 DMRTA1Q5VZB9 504 aa16.46■□□□□ 0.23
ZNF554-201ENST00000317243 RPUSD4Q96CM3 377 aaKnown RBP16.46■□□□□ 0.23
ZNF554-201ENST00000317243 HIPK2Q9H2X6 1198 aa16.46■□□□□ 0.23
ZNF554-201ENST00000317243 CHD3Q12873 2000 aaKnown RBP16.46■□□□□ 0.23
ZNF554-201ENST00000317243 H7BYZ3 331 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 BAXQ07812 192 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 DTD1Q8TEA8 209 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 OR5B12Q96R08 314 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 ZPBPQ9BS86 351 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 C1QTNF5Q9BXJ0 243 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 Q9N2K0 584 aa16.46■□□□□ 0.22
ZNF554-201ENST00000317243 TNRC6AQ8NDV7 1962 aaKnown RBP16.45■□□□□ 0.22
ZNF554-201ENST00000317243 ZNF816-ZNF321PA0A0X1KG74 233 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 ZNF883P0CG24 379 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 IRF2P14316 349 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 PAX9P55771 341 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 TMEM164Q5U3C3 297 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 MYPOPQ86VE0 399 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-201ENST00000317243 DIRC2Q96SL1 478 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 IFNA5P01569 189 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 CD33P20138 364 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 HOXA4Q00056 320 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-201ENST00000317243 ID3Q02535 119 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 BSXQ3C1V8 233 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 ARSJQ5FYB0 599 aaPredicted RBP16.45■□□□□ 0.22
ZNF554-201ENST00000317243 NAT8Q9UHE5 227 aa16.45■□□□□ 0.22
ZNF554-201ENST00000317243 KIR2DL5BA0A0G2JN68 375 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 KIR2DL5BA0A0G2JPC4 375 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 SLC22A20A6NK97 555 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 ZNF705FA8MVS1 300 aaPredicted RBP16.44■□□□□ 0.22
ZNF554-201ENST00000317243 ZNF705DP0CH99 300 aaPredicted RBP16.44■□□□□ 0.22
ZNF554-201ENST00000317243 ZNF705BP0CI00 300 aaPredicted RBP16.44■□□□□ 0.22
ZNF554-201ENST00000317243 VDAC1P21796 283 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 CCKARP32238 428 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 PCBD1P61457 104 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 MRPS11P82912 194 aaKnown RBP16.44■□□□□ 0.22
ZNF554-201ENST00000317243 PRDX4Q13162 271 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 BATFQ16520 125 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 TMEM241Q24JQ0 296 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 NMSQ5H8A3 153 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 KIR2DL5AQ8N109 375 aa16.44■□□□□ 0.22
ZNF554-201ENST00000317243 PRR18Q8N4B5 295 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms