RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TSC2P49815 1807 aa13.55□□□□□ -0.24
HCFC1-201ENST00000310441 A0A0B4J293 547 aa13.55□□□□□ -0.24
HCFC1-201ENST00000310441 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
HCFC1-201ENST00000310441 ISOC2Q96AB3 205 aa13.55□□□□□ -0.24
HCFC1-201ENST00000310441 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 ZNF645Q8N7E2 425 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 TNFSF14O43557 240 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
HCFC1-201ENST00000310441 ZNF714Q96N38 554 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 NPBWR2P48146 333 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 SMUG1Q53HV7 270 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 LPAR2Q9HBW0 351 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 RPL36A-HNRNPH2H7BZ11 118 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 SMIM13P0DJ93 91 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
HCFC1-201ENST00000310441 VAX1Q5SQQ9 334 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 ORAI1Q96D31 301 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 MEGF10Q96KG7 1140 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 MRM2Q9UI43 246 aaKnown RBP13.54□□□□□ -0.24
HCFC1-201ENST00000310441 TMEM250H0YL14 139 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 WDR54Q9H977 334 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 PCP4P48539 62 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 CYB561D1Q8N8Q1 229 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 OR2H1Q9GZK4 316 aa13.54□□□□□ -0.24
HCFC1-201ENST00000310441 SELENOPP49908 381 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 RHBDD2Q6NTF9 364 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 OVCH2Q7RTZ1 564 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 RELQ04864 619 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-201ENST00000310441 HSPB9Q9BQS6 159 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 OR2Y1Q8NGV0 311 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 FRRS1LQ9P0K9 344 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 FFAR1O14842 300 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 NDUFA2O43678 99 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 TEX30Q5JUR7 227 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 CBLN2Q8IUK8 224 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 MARS2Q96GW9 593 aaKnown RBP13.53□□□□□ -0.24
HCFC1-201ENST00000310441 AKIRIN1Q9H9L7 192 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-201ENST00000310441 PRSS2P07478 247 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 LOXL3P58215 753 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 SOX21Q9Y651 276 aaPredicted RBP13.53□□□□□ -0.24
HCFC1-201ENST00000310441 ROS1P08922 2347 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
HCFC1-201ENST00000310441 SBF2Q86WG5 1849 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 TMEM240Q5SV17 173 aa13.53□□□□□ -0.24
HCFC1-201ENST00000310441 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 TMEM101Q96IK0 257 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 SOD3P08294 240 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 SBK3P0C264 359 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 CYB5R2Q6BCY4 276 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 MOGAT3Q86VF5 341 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 SFRP2Q96HF1 295 aa13.52□□□□□ -0.24
HCFC1-201ENST00000310441 CLEC2AQ6UVW9 174 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 NTMQ9P121 344 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 CD1AP06126 327 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 PXMP4Q9Y6I8 212 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 UCNP55089 124 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 HOGA1Q86XE5 327 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 ADAMTSL3P82987 1691 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 NKX2-6A6NCS4 301 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 RPL8P62917 257 aaKnown RBP13.52□□□□□ -0.25
HCFC1-201ENST00000310441 SH2D5Q6ZV89 423 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
HCFC1-201ENST00000310441 DLL1O00548 723 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 TP53I13Q8NBR0 393 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-201ENST00000310441 ST6GAL2Q96JF0 529 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 H3BRM9 83 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 MT-CO3P00414 261 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 MEF2CQ06413 473 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-201ENST00000310441 OR1P1Q8NH06 330 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 GAB4Q2WGN9 574 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 GCSAMQ8N6F7 178 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 PLA2G3Q9NZ20 509 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 ZNF137PP52743 207 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 TMEM196Q5HYL7 178 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 SF3B6Q9Y3B4 125 aaKnown RBP13.51□□□□□ -0.25
HCFC1-201ENST00000310441 CDIPTO14735 213 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 RECKO95980 971 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 MDP1Q86V88 176 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 FOXQ1Q9C009 403 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 ABHD3Q8WU67 409 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
HCFC1-201ENST00000310441 ADAP1O75689 374 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 CXCL10P02778 98 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 EPHA8P29322 1005 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-201ENST00000310441 VSTM2LQ96N03 204 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 TRPM7Q96QT4 1865 aa13.51□□□□□ -0.25
HCFC1-201ENST00000310441 NUTF2P61970 127 aaKnown RBP13.5□□□□□ -0.25
HCFC1-201ENST00000310441 PNLIPP16233 465 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 H3BMH7 237 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 PSG2P11465 335 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FOXC1Q12948 553 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 ALG14Q96F25 216 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 AQP10Q96PS8 301 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms