RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TCF21O43680 179 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 OR10J1P30954 320 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
APOBEC3F-201ENST00000308521 HERV-K104P61576 105 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 BAXQ07812 192 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM211Q6ICI0 200 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 OR11L1Q8NGX0 322 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TP53RKQ96S44 253 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 NIPSNAP3BQ9BS92 247 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 CTDSP1Q9GZU7 261 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM222Q9H0R3 208 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 SRD5A3Q9H8P0 318 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TLN1Q9Y490 2541 aaKnown RBP8.8□□□□□ -1
APOBEC3F-201ENST00000308521 IGKV1-27A0A075B6S5 117 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 DUXBA0A1W2PPF3 345 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 CLEC18AA5D8T8 446 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 NKX2-6A6NCS4 301 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 CLDN34H7C241 214 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 ANGPTL7O43827 346 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 NUFIP2Q7Z417 695 aaKnown RBP8.8□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF100Q8IYN0 542 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM252Q8N6L7 170 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 CLEC18CQ8NCF0 446 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 WDYHV1Q96HA8 205 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 GPR35Q9HC97 309 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 DNAJC4Q9NNZ3 241 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 WSB1Q9Y6I7 421 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 PIEZO1Q92508 2521 aa8.8□□□□□ -1
APOBEC3F-201ENST00000308521 TPRP12270 2363 aaKnown RBP8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 H0YL77 283 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 SPRY1O43609 319 aaPredicted RBP8.79□□□□□ -1
APOBEC3F-201ENST00000308521 AADACP22760 399 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 SLC25A24Q6NUK1 477 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF343Q6P1L6 599 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TGIF2LYQ8IUE0 185 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 OSR2Q8N2R0 312 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 CLDND2Q8NHS1 167 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 DIRC2Q96SL1 478 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 FOXB1Q99853 325 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 ZDHHC11Q9H8X9 412 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF32P17041 273 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 CRYGSP22914 178 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 ASCL1P50553 236 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 SNAI3Q3KNW1 292 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM42Q69YG0 159 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TEX38Q6PEX7 206 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 MCEMP1Q8IX19 187 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 MRPL41Q8IXM3 137 aaKnown RBP8.79□□□□□ -1
APOBEC3F-201ENST00000308521 CYB561D1Q8N8Q1 229 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM171Q8WVE6 324 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 SNX22Q96L94 193 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TAAR6Q96RI8 345 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TMEM38BQ9NVV0 291 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF581Q9P0T4 197 aa8.79□□□□□ -1
APOBEC3F-201ENST00000308521 TRAV17A0A0B4J275 112 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 GEMIN2O14893 280 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 PDCD6O75340 191 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF205O95201 554 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 PPYP01298 95 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 IRF2P14316 349 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 VAMP2P63027 116 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 HLA-DRB3P79483 266 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ATP6V1FQ16864 119 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 MAJINQ3KP22 176 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 FAM27BQ5VT28 67 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 IGFL2Q6UWQ7 119 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 MEX3BQ6ZN04 569 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 Q6ZS49 121 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 SELENOHQ8IZQ5 122 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 BORCS8Q96FH0 119 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 RFNGQ9Y644 331 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 NBASA2RRP1 2371 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 LOC102723971A0A1B0GUV8 181 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 PGA5P0DJD9 388 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 GLI4P10075 376 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 DYNLT3P51808 116 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 MRPS34P82930 218 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ARF1P84077 181 aaKnown RBP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ID3Q02535 119 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 IL24Q13007 206 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 MALLQ13021 153 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 SRSF7Q16629 238 aaKnown RBP eCLIP8.78□□□□□ -1
APOBEC3F-201ENST00000308521 OR8G2PQ6IF36 304 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ZNF695Q8IW36 515 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 ODF3L1Q8IXM7 274 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 OR5C1Q8NGR4 320 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 DYRK2Q92630 601 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 PRSS50Q9UI38 385 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 PCNX1Q96RV3 2341 aa8.78□□□□□ -1
APOBEC3F-201ENST00000308521 CYB5R3P00387 301 aaPredicted RBP8.77□□□□□ -1
APOBEC3F-201ENST00000308521 CCL2P13500 99 aa8.77□□□□□ -1
APOBEC3F-201ENST00000308521 PSG4Q00888 419 aa8.77□□□□□ -1
APOBEC3F-201ENST00000308521 OR5I1Q13606 314 aa8.77□□□□□ -1
APOBEC3F-201ENST00000308521 OR2AE1Q8NHA4 323 aa8.77□□□□□ -1
APOBEC3F-201ENST00000308521 CPT1CQ8TCG5 803 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms