RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ETFRF1Q6IPR1 90 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF645Q8N7E2 425 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 WBP1Q96G27 269 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 GFRA3O60609 400 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 C4orf17Q53FE4 359 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 SELENOHQ8IZQ5 122 aaKnown RBP9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 TCTEX1D1Q8N7M0 179 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR52M1Q8NGK5 317 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 NABP1Q96AH0 204 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 FLYWCH2Q96CP2 140 aaKnown RBP9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 IL19Q9UHD0 177 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 PLXND1Q9Y4D7 1925 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 IGKV3D-15A0A087WSY6 115 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 TSTD3H0UI37 97 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 CRYGSP22914 178 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 RUNX1Q01196 453 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 FGFRL1Q8N441 504 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 POC1AQ8NBT0 407 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 FGFBP3Q8TAT2 258 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 GPR146Q96CH1 333 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 CLDN34H7C241 214 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 HOXD11P31277 338 aaPredicted RBP9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 GLRXP35754 106 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 GLIPR1P48060 266 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 PSG7Q13046 419 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 FAM24BQ8N5W8 94 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 GCSAMQ8N6F7 178 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 C9orf106Q8NAJ2 232 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF835Q9Y2P0 537 aa9.75□□□□□ -0.85
PCDHGC3-201ENST00000308177 DENND4CQ5VZ89 1909 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 CT45A10P0DMU9 189 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 ARL3P36405 182 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 ACSF3Q4G176 576 aaPredicted RBP9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 PDZD11Q5EBL8 140 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 MS4A7Q9GZW8 240 aaPredicted RBP9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 LY6G6EA0A0G2JKS1 128 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 A0A1W2PRD5 423 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 A0A1W2PRF3 423 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 A0A1W2PRM7 423 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 K7N7A8 449 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 NPY1RP25929 384 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 TNXAQ16473 311 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 DBX2Q6ZNG2 339 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 FAM89BQ8N5H3 189 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 U3KQA8 63 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 WNT9BO14905 357 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 CELA3BP08861 270 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 CNN1P51911 297 aaKnown RBP9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 GFRA1P56159 465 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 AWAT1Q58HT5 328 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 RHOVQ96L33 236 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 PQLC2LA1A4F0 135 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF320A2RRD8 509 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 RBP4P02753 201 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 SSMEM1Q8WWF3 244 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 CALYQ9NYX4 217 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
PCDHGC3-201ENST00000308177 C1QL1O75973 258 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 SFTPCP11686 197 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 FAM27E3Q08E93 113 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 IL22RA2Q969J5 263 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 ZNF714Q96N38 554 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 AKAP6Q13023 2319 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 REG1BP48304 166 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 FOXG1P55316 489 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 RPL11P62913 178 aaKnown RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 HABP2Q14520 560 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 ACSM6Q6P461 480 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 LILRB1Q8NHL6 650 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 HIF1ANQ9NWT6 349 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 J3QR06 171 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 NUBP1P53384 320 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 PRR27Q6MZM9 219 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 ABHD17AQ96GS6 310 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 SPRR3Q9UBC9 169 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 CYB5R3P00387 301 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 CBLN2Q8IUK8 224 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 PCNX1Q96RV3 2341 aa9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 LYRM2Q9NU23 88 aaPredicted RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 CISD1Q9NZ45 108 aaKnown RBP9.73□□□□□ -0.85
PCDHGC3-201ENST00000308177 MYO7BQ6PIF6 2116 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 SERF2P84101 59 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 NSUN5P2Q63ZY6 315 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 SLC35E4Q6ICL7 350 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 DRAM1Q8N682 238 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 OR1L8Q8NGR8 309 aa9.72□□□□□ -0.85
PCDHGC3-201ENST00000308177 DOK5Q9P104 306 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms