RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 GRIFINA4D1Z8 144 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 CD55P08174 381 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 ZNF133P52736 654 aaPredicted RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 MMDQ15546 238 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 SPSB3Q6PJ21 355 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 C20orf196Q8IYI0 205 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 OR8G5Q8NG78 346 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 OR1L6Q8NGR2 347 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 ZNF524Q96C55 264 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 DIDO1Q9BTC0 2240 aaKnown RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 PCNX3Q9H6A9 2034 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 AQP7P3A6NL99 342 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 KLF3P57682 345 aaPredicted RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 MRGPRGQ86SM5 289 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 GBGT1Q8N5D6 347 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 ABHD3Q8WU67 409 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 ALKBH3Q96Q83 286 aaPredicted RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 PLEK2Q9NYT0 353 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 RNF150Q9ULK6 438 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 WIPF3A6NGB9 483 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 IFNL4K9M1U5 179 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 CHST1O43916 411 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 EFNA2O43921 213 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 IAPPP10997 89 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 CRISP2P16562 243 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 PMCHP20382 165 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 ZNF121P58317 390 aaPredicted RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 TAS2R30P59541 319 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 IGF2-ASQ6U949 168 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 GCNT2Q8N0V5 402 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 KLHDC1Q8N7A1 406 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 OR10S1Q8NGN2 331 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
LSM3-201ENST00000306024 CD300LBA8K4G0 201 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 WISP1O95388 367 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 NTF3P20783 257 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 RND2P52198 227 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 HBG1P69891 147 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 HBG2P69892 147 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 HTD2P86397 168 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 CXorf66Q5JRM2 361 aaPredicted RBP9.35□□□□□ -0.91
LSM3-201ENST00000306024 CISD2Q8N5K1 135 aaKnown RBP9.35□□□□□ -0.91
LSM3-201ENST00000306024 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 ZNF816-ZNF321PA0A0X1KG74 233 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 RNF212BA8MTL3 300 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 ITGB1BP1O14713 200 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 ANGPTL7O43827 346 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 NPIPB7O75200 414 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 ISG15P05161 165 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 KITLGP21583 273 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 UCP2P55851 309 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 ZNF90Q03938 601 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 TGIF2LYQ8IUE0 185 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 MANBALQ9NQG1 85 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
LSM3-201ENST00000306024 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 IGLV1-36A0A0B4J1U3 117 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 F6UZH7 168 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 MS4A18H0YCH9 400 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 CFPP27918 469 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 CDAP32320 146 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 PLP2Q04941 152 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 IL15RAQ13261 267 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 TMEM187Q14656 261 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 MS4A18Q3C1V0 323 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 SLC25A53Q5H9E4 307 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 OR8G2PQ6IF36 304 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 DOK3Q7L591 496 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 FAM58AQ8N1B3 248 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 NOXO1Q8NFA2 376 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 YPEL4Q96NS1 127 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 RBKSQ9H477 322 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
LSM3-201ENST00000306024 SPTBN1Q01082 2364 aaKnown RBP9.34□□□□□ -0.91
LSM3-201ENST00000306024 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 OR7C1O76099 320 aaPredicted RBP9.34□□□□□ -0.91
LSM3-201ENST00000306024 RBPJQ06330 500 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 MSMO1Q15800 293 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 TMEM256Q8N2U0 113 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 MRPL30Q8TCC3 161 aaKnown RBP9.34□□□□□ -0.91
LSM3-201ENST00000306024 ASB10Q8WXI3 467 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 RCC1LQ96I51 464 aaKnown RBP9.34□□□□□ -0.91
LSM3-201ENST00000306024 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 SLC25A22Q9H936 323 aa9.34□□□□□ -0.91
LSM3-201ENST00000306024 WIPI2Q9Y4P8 454 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms