RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 PRDX4Q13162 271 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 RNPS1Q15287 305 aaKnown RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF705AQ6ZN79 300 aaPredicted RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 CLEC18CQ8NCF0 446 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 REPIN1Q9BWE0 567 aaKnown RBP13.72□□□□□ -0.21
LONRF3-201ENST00000304778 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 FREM1Q5H8C1 2179 aa13.72□□□□□ -0.21
LONRF3-201ENST00000304778 SCGB1D1O95968 90 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 CD55P08174 381 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 CCL11P51671 97 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 SOX8P57073 446 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 VAMP2P63027 116 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 NMSQ5H8A3 153 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 CXorf66Q5JRM2 361 aaPredicted RBP13.71□□□□□ -0.21
LONRF3-201ENST00000304778 LRP11Q86VZ4 500 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 DIRC2Q96SL1 478 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 GLRX2Q9NS18 164 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 VAX2Q9UIW0 290 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TRGV5A0A0B4J1U4 118 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 IGKV1D-13A0A0B4J2D9 117 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM210A6NLX4 147 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TUSC2O75896 110 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 OPN1MWP04001 364 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 IGKV1-13P0DP09 117 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TUBG1P23258 451 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 UCP1P25874 307 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 PMP22Q01453 160 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TCF15Q12870 199 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 CLEC12BQ2HXU8 276 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 OR5C1Q8NGR4 320 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 WFIKKN1Q96NZ8 548 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TMEM242Q9NWH2 141 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 DNAJC13O75165 2243 aa13.71□□□□□ -0.21
LONRF3-201ENST00000304778 TNRC6AQ8NDV7 1962 aaKnown RBP13.71□□□□□ -0.22
LONRF3-201ENST00000304778 PROB1E7EW31 1015 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 HSPA12AO43301 675 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 SPINK2P20155 84 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 GPM6AP51674 278 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 FAM90A2PQ658T7 463 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 FAM180AQ6UWF9 173 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 TMEM178AQ8NBL3 297 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 PRSS33Q8NF86 280 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 HS3ST6Q96QI5 342 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 C12orf49Q9H741 205 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 CRIM1Q9NZV1 1036 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 PRSS50Q9UI38 385 aa13.71□□□□□ -0.22
LONRF3-201ENST00000304778 KIR2DS1A0A191URI9 304 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 WT1P19544 449 aaPredicted RBP13.7□□□□□ -0.22
LONRF3-201ENST00000304778 VDAC1P21796 283 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 KIR2DS4P43632 304 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 TNFSF10P50591 281 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
LONRF3-201ENST00000304778 KIR2DS1Q14954 304 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 MPV17LQ2QL34 196 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 COA6Q5JTJ3 125 aaKnown RBP13.7□□□□□ -0.22
LONRF3-201ENST00000304778 C1orf194Q5T5A4 169 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 ZDHHC23Q8IYP9 409 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
LONRF3-201ENST00000304778 GNG13Q9P2W3 67 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 IL36RNQ9UBH0 155 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 PRR33A8MZF0 331 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 H3BP45 60 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 BAXQ07812 192 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 COTL1Q14019 142 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 CEACAM21Q3KPI0 293 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 ZNF573Q86YE8 665 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 ODF3L1Q8IXM7 274 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 TMEM18Q96B42 140 aa13.7□□□□□ -0.22
LONRF3-201ENST00000304778 POLR3KQ9Y2Y1 108 aaPredicted RBP13.7□□□□□ -0.22
LONRF3-201ENST00000304778 C5orf49A4QMS7 147 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 ZNF732B4DXR9 585 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 ID3Q02535 119 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 SP5Q6BEB4 398 aaPredicted RBP13.69□□□□□ -0.22
LONRF3-201ENST00000304778 MYPOPQ86VE0 399 aaPredicted RBP13.69□□□□□ -0.22
LONRF3-201ENST00000304778 FDCSPQ8NFU4 85 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 MTCH1Q9NZJ7 389 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 LAMP3Q9UQV4 416 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 ATP23Q9Y6H3 246 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 HSPB6O14558 160 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 TMEM50AO95807 157 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 IRF2P14316 349 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 DYNLT3P51808 116 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 CLN3Q13286 438 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
LONRF3-201ENST00000304778 PLPPR1Q8TBJ4 325 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 NEK7Q8TDX7 302 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 ZDHHC11Q9H8X9 412 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 ESPL1Q14674 2120 aa13.69□□□□□ -0.22
LONRF3-201ENST00000304778 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
LONRF3-201ENST00000304778 C3orf80F5H4A9 247 aa13.68□□□□□ -0.22
LONRF3-201ENST00000304778 M0QZK8 103 aa13.68□□□□□ -0.22
LONRF3-201ENST00000304778 GGCTO75223 188 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms