RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SNRPCP09234 159 aaKnown RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 RNF224P0DH78 156 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 HKR1P10072 659 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 HSPB8Q9UJY1 196 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 NAT1P18440 290 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 CXorf66Q5JRM2 361 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 LYRM7Q5U5X0 104 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 PRNTQ86SH4 94 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 SLC25A45Q8N413 288 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF714Q96N38 554 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 RTTNQ86VV8 2226 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 COL11A1P12107 1806 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 MGPP08493 103 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 ZXDCQ2QGD7 858 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 LAIR2Q6ISS4 152 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 WDFY1Q8IWB7 410 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 GBGT1Q8N5D6 347 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 OR2V2Q96R30 315 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 TUBD1Q9UJT1 453 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 CIDEAO60543 219 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 PKIAP61925 76 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 C1orf185Q5T7R7 199 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 PIKFYVEQ9Y2I7 2098 aa12.04□□□□□ -0.48
PRKCB-201ENST00000303531 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 PUSL1Q8N0Z8 303 aaKnown RBP12.04□□□□□ -0.48
PRKCB-201ENST00000303531 IGKV1D-42A0A075B6H8 117 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 ERVH48-1M5A8F1 160 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 CFDP00746 253 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-201ENST00000303531 SMIM10L1P0DMW3 83 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 SMIM10Q96HG1 83 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 IL36RNQ9UBH0 155 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 PSMB2P49721 201 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 RBKSQ9H477 322 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 C1orf174Q8IYL3 243 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 MARS2Q96GW9 593 aaKnown RBP12.03□□□□□ -0.48
PRKCB-201ENST00000303531 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 NDUFB4O95168 129 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 HYPMO75409 117 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 PGLYRP1O75594 196 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-201ENST00000303531 IFI6P09912 130 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 SLC35B1P78383 322 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 M0QZK8 103 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
PRKCB-201ENST00000303531 KLK2P20151 261 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 CEBPDP49716 269 aaPredicted RBP12.03□□□□□ -0.48
PRKCB-201ENST00000303531 H2BFSP57053 126 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
PRKCB-201ENST00000303531 HERVK_113P61574 105 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 UNQ9370/PRO34162Q6UXP9 181 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 GPHA2Q96T91 129 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 PCGF1Q9BSM1 259 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 G6PC2Q9NQR9 355 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 CTHRC1Q96CG8 243 aa12.02□□□□□ -0.48
PRKCB-201ENST00000303531 NPDC1Q9NQX5 325 aaPredicted RBP12.02□□□□□ -0.48
PRKCB-201ENST00000303531 FCARP24071 287 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 MFAP2P55001 183 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FGF5P12034 268 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 MPV17P39210 176 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 RPL24P83731 157 aaKnown RBP12.02□□□□□ -0.49
PRKCB-201ENST00000303531 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF98A6NK75 572 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 C5orf66Q9H5L9 145 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 RABAC1Q9UI14 185 aa12.02□□□□□ -0.49
PRKCB-201ENST00000303531 C5orf52A6NGY3 159 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 DIRC3C9JPN6 131 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 CCL21O00585 134 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 P2RX4Q99571 388 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 NUDT16L1Q9BRJ7 211 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 SMUG1Q53HV7 270 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 SPTA1P02549 2419 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 SUCLG1P53597 346 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 P2RY6Q15077 328 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 CCDC144NLQ6NUI1 221 aa12.01□□□□□ -0.49
PRKCB-201ENST00000303531 SELENOHQ8IZQ5 122 aaKnown RBP12.01□□□□□ -0.49
PRKCB-201ENST00000303531 AQP10Q96PS8 301 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms