RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 SPINT2O43291 252 aa12.02□□□□□ -0.48
SDC2-201ENST00000302190 PGLYRP1O75594 196 aaPredicted RBP12.02□□□□□ -0.48
SDC2-201ENST00000302190 GPR12P47775 334 aa12.02□□□□□ -0.48
SDC2-201ENST00000302190 BTNL8Q6UX41 500 aa12.02□□□□□ -0.48
SDC2-201ENST00000302190 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.48
SDC2-201ENST00000302190 EGLN1Q9GZT9 426 aa12.02□□□□□ -0.48
SDC2-201ENST00000302190 V9GYS6 101 aa12.02□□□□□ -0.48
SDC2-201ENST00000302190 INTS1Q8N201 2190 aaKnown RBP12.02□□□□□ -0.48
SDC2-201ENST00000302190 M0R1X1 148 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
SDC2-201ENST00000302190 SELENOHQ8IZQ5 122 aaKnown RBP12.02□□□□□ -0.49
SDC2-201ENST00000302190 FAM89BQ8N5H3 189 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 OR2M7Q8NG81 312 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 SIGLEC12Q96PQ1 595 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 RAB40CQ96S21 281 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 IL17BQ9UHF5 180 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 MGST1P10620 155 aaKnown RBP12.02□□□□□ -0.49
SDC2-201ENST00000302190 KITLGP21583 273 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 C10orf128Q5T292 105 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 C17orf82Q86X59 251 aaPredicted RBP12.02□□□□□ -0.49
SDC2-201ENST00000302190 C10orf35Q96D05 121 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 CHRNA10Q9GZZ6 450 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 DEPPQ9NTK1 212 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 MTCH1Q9NZJ7 389 aa12.02□□□□□ -0.49
SDC2-201ENST00000302190 DSPP15924 2871 aaKnown RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 LY6G6EA0A0G2JKS1 128 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 HTD2P86397 168 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 EIF3IQ13347 325 aaKnown RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 SSPNQ14714 243 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR8B8Q15620 311 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 ZNF705AQ6ZN79 300 aaPredicted RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 NUFIP2Q7Z417 695 aaKnown RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR52L2PQ8NGH6 319 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR10G9Q8NGN4 311 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 SSMEM1Q8WWF3 244 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 FER1L6-AS2Q96M78 137 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 WDR54Q9H977 334 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 U3KQA8 63 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 CHD8Q9HCK8 2581 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 SPRY3O43610 288 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 PGA5P0DJD9 388 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 PPP1CBP62140 327 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 IL24Q13007 206 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 MST1LQ2TV78 715 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 TMEM251Q8N6I4 163 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 ZNF391Q9UJN7 358 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 IGLV3-12A0A075B6K2 115 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 hCG_38984A0A1B0GV85 526 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 MDFIC2A0A1B0GVS7 189 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 PAGE4O60829 102 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 COX5AP20674 150 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 FGF12P61328 243 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 TM2D1Q9BX74 207 aa12.01□□□□□ -0.49
SDC2-201ENST00000302190 RIMS4Q9H426 269 aaPredicted RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 KLF13Q9Y2Y9 288 aaPredicted RBP12.01□□□□□ -0.49
SDC2-201ENST00000302190 MRPL14Q6P1L8 145 aaKnown RBP12□□□□□ -0.49
SDC2-201ENST00000302190 DNM1P46Q6ZS02 220 aa12□□□□□ -0.49
SDC2-201ENST00000302190 SLC25A40Q8TBP6 338 aa12□□□□□ -0.49
SDC2-201ENST00000302190 TMEM54Q969K7 222 aa12□□□□□ -0.49
SDC2-201ENST00000302190 OR4C12Q96R67 309 aa12□□□□□ -0.49
SDC2-201ENST00000302190 ACTR3CQ9C0K3 210 aaPredicted RBP12□□□□□ -0.49
SDC2-201ENST00000302190 Q9N2K0 584 aa12□□□□□ -0.49
SDC2-201ENST00000302190 KIAA1456Q9P272 454 aa12□□□□□ -0.49
SDC2-201ENST00000302190 MED13Q9UHV7 2174 aa12□□□□□ -0.49
SDC2-201ENST00000302190 PINLYPA6NC86 204 aa12□□□□□ -0.49
SDC2-201ENST00000302190 TMEM241Q24JQ0 296 aa12□□□□□ -0.49
SDC2-201ENST00000302190 ANKRD39Q53RE8 183 aa12□□□□□ -0.49
SDC2-201ENST00000302190 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
SDC2-201ENST00000302190 BAGE3Q86Y29 109 aa12□□□□□ -0.49
SDC2-201ENST00000302190 BAGE2Q86Y30 109 aa12□□□□□ -0.49
SDC2-201ENST00000302190 NABP1Q96AH0 204 aa12□□□□□ -0.49
SDC2-201ENST00000302190 IMMP1LQ96LU5 166 aa12□□□□□ -0.49
SDC2-201ENST00000302190 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
SDC2-201ENST00000302190 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
SDC2-201ENST00000302190 TMEM100Q9NV29 134 aa12□□□□□ -0.49
SDC2-201ENST00000302190 DLL3Q9NYJ7 618 aa12□□□□□ -0.49
SDC2-201ENST00000302190 SPG11Q96JI7 2443 aa12□□□□□ -0.49
SDC2-201ENST00000302190 KLF7O75840 302 aaPredicted RBP12□□□□□ -0.49
SDC2-201ENST00000302190 MT-CO3P00414 261 aa12□□□□□ -0.49
SDC2-201ENST00000302190 FGF5P12034 268 aa12□□□□□ -0.49
SDC2-201ENST00000302190 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
SDC2-201ENST00000302190 OR1L1Q8NH94 360 aa12□□□□□ -0.49
SDC2-201ENST00000302190 TTTY12Q9BZ98 90 aa12□□□□□ -0.49
SDC2-201ENST00000302190 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 GALR1P47211 349 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 RAB31Q13636 194 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 CEACAM21Q3KPI0 293 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 PPP1R32Q7Z5V6 425 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 FADS6Q8N9I5 356 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 PPP1R35Q8TAP8 253 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 ATP23Q9Y6H3 246 aa11.99□□□□□ -0.49
SDC2-201ENST00000302190 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms