RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 DAP3P51398 398 aaKnown RBP12.31□□□□□ -0.44
CDT1-201ENST00000301019 ZNF841Q6ZN19 808 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 SLC37A2Q8TED4 501 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 Q96M66 194 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 NRN1Q9NPD7 142 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 BET1LQ9NYM9 111 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 CDC34P49427 236 aaPredicted RBP12.31□□□□□ -0.44
CDT1-201ENST00000301019 NSDHLQ15738 373 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 IGFBP7Q16270 282 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 GAB4Q2WGN9 574 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 HLA-DRB5Q30154 266 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 PLCXD3Q63HM9 321 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 OR10G4Q8NGN3 311 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 OR10G9Q8NGN4 311 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 OR10G7Q8NGN6 311 aa12.31□□□□□ -0.44
CDT1-201ENST00000301019 ABCA7Q8IZY2 2146 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 IGKV1-12A0A0C4DH73 117 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 MT-ATP6P00846 226 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 IGKV1D-12P01611 117 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 FUT7Q11130 342 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 CLN8Q9UBY8 286 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 LTBRP36941 435 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 PARM1Q6UWI2 310 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 PIGCQ92535 297 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 FGF14Q92915 247 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 LRFN3Q9BTN0 628 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 CSTL1Q9H114 145 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 GNB4Q9HAV0 340 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 A0A0J9YY10 115 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 VSTM2BA6NLU5 285 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 CLPSP04118 112 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 RPS21P63220 83 aaKnown RBP12.3□□□□□ -0.44
CDT1-201ENST00000301019 TFF3Q07654 80 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 FXYD3Q14802 87 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
CDT1-201ENST00000301019 YAF2Q8IY57 180 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 BORCS8Q96FH0 119 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 TCFL5Q9UL49 500 aa12.3□□□□□ -0.44
CDT1-201ENST00000301019 WDFY4Q6ZS81 3184 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 MDFIC2A0A1B0GVS7 189 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 CCNOP22674 350 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 TSPOP30536 169 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 GUCA1AP43080 201 aaPredicted RBP12.29□□□□□ -0.44
CDT1-201ENST00000301019 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZP4Q12836 540 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ORAOV1Q8WV07 137 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZNF430Q9H8G1 570 aaPredicted RBP12.29□□□□□ -0.44
CDT1-201ENST00000301019 CRIM1Q9NZV1 1036 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZNF253O75346 499 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
CDT1-201ENST00000301019 FUT6P51993 359 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ID3Q02535 119 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 RUNX3Q13761 415 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 PRR27Q6MZM9 219 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZNF525Q8N782 197 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 OR8G5Q8NG78 346 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 ZNF837Q96EG3 531 aaPredicted RBP12.29□□□□□ -0.44
CDT1-201ENST00000301019 FBLN5Q9UBX5 448 aa12.29□□□□□ -0.44
CDT1-201ENST00000301019 LOC102725191A0A1B0GVB3 256 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 OR6C6A6NF89 314 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 FOXI3A8MTJ6 420 aaPredicted RBP12.28□□□□□ -0.44
CDT1-201ENST00000301019 VDAC1P21796 283 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 IGFBP4P22692 258 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 TNFSF4P23510 183 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 EDDM3BP56851 147 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 SRPXP78539 464 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 C1orf174Q8IYL3 243 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 FAM58AQ8N1B3 248 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 PINX1Q96BK5 328 aaKnown RBP12.28□□□□□ -0.44
CDT1-201ENST00000301019 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 ELOVL5Q9NYP7 299 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 A0A1W2PRS3 328 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 GNG7O60262 68 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 CLDN14O95500 239 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 ECI1P42126 302 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 GNB1P62873 340 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 OR8I2Q8N0Y5 310 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 AGMATQ9BSE5 352 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 ATP23Q9Y6H3 246 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 DPRXA6NFQ7 191 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 HS3ST1O14792 307 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 WDR1O75083 606 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 C3orf79P0CE67 100 aa12.28□□□□□ -0.44
CDT1-201ENST00000301019 SELENOVP59797 346 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms