RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 SPIN2BQ9BPZ2 258 aa13.27□□□□□ -0.29
UBAP1-201ENST00000297661 FGF23Q9GZV9 251 aaPredicted RBP13.27□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.29
UBAP1-201ENST00000297661 NAT8Q9UHE5 227 aa13.27□□□□□ -0.29
UBAP1-201ENST00000297661 PRSS50Q9UI38 385 aa13.27□□□□□ -0.29
UBAP1-201ENST00000297661 KIAA2026Q5HYC2 2103 aa13.27□□□□□ -0.29
UBAP1-201ENST00000297661 H7BYZ3 331 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 HPRT1P00492 218 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 PPYP01298 95 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 GNG10P50151 68 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ACTL10Q5JWF8 245 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 VSIRQ9H7M9 311 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 SLC7A10Q9NS82 523 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 UBE2J1Q9Y385 318 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF816-ZNF321PA0A0X1KG74 233 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF503-AS2A6NEH8 195 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 CHST1O43916 411 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 SCTP09683 121 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 WNT5AP41221 380 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF726P1Q15940 193 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ASCL4Q6XD76 172 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 SSX7Q7RTT5 188 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 LPAR2Q9HBW0 351 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 Q9N2K0 584 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 C5orf49A4QMS7 147 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF705FA8MVS1 300 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF705DP0CH99 300 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF705BP0CI00 300 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 OR10J1P30954 320 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 UCP3P55916 312 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 SRPXP78539 464 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ARF1P84077 181 aaKnown RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 RTP5Q14D33 572 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 BSXQ3C1V8 233 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 EXTL1Q92935 676 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF488Q96MN9 340 aa13.26□□□□□ -0.29
UBAP1-201ENST00000297661 RIMS4Q9H426 269 aaPredicted RBP13.26□□□□□ -0.29
UBAP1-201ENST00000297661 DSPP15924 2871 aaKnown RBP13.25□□□□□ -0.29
UBAP1-201ENST00000297661 ACACAQ13085 2346 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 PCSK5Q92824 1860 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 A0A1W2PNU3 283 aaPredicted RBP13.25□□□□□ -0.29
UBAP1-201ENST00000297661 CYC1P08574 325 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 IL24Q13007 206 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 NEK7Q8TDX7 302 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 KCNE4Q8WWG9 221 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 SIGLEC12Q96PQ1 595 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 RBKSQ9H477 322 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 FAM166BA8MTA8 275 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 IFNA5P01569 189 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 SELEP16581 610 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 GNRHRP30968 328 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 BRS3P32247 399 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 CYB561P49447 251 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 OR8B8Q15620 311 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 C3AR1Q16581 482 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 KRTAP27-1Q3LI81 207 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 CT55Q8WUE5 264 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 TBX15Q96SF7 602 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 PRRG4Q9BZD6 226 aa13.25□□□□□ -0.29
UBAP1-201ENST00000297661 APC2O95996 2303 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 H3BP45 60 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 MRPL33O75394 65 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 MT-CO3P00414 261 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 HRASP01112 189 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 NGFP01138 241 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 ID3Q02535 119 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 TBC1D26Q86UD7 250 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 VASH2Q86V25 355 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 SELENOHQ8IZQ5 122 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 TMEM56-RWDD3S4R434 201 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 CNN1P51911 297 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 MRPL52Q86TS9 123 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 MBD3L1Q8WWY6 194 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 ABHD14BQ96IU4 210 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 ASCL3Q9NQ33 180 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 OR6C3Q9NZP0 311 aa13.24□□□□□ -0.29
UBAP1-201ENST00000297661 CHD3Q12873 2000 aaKnown RBP13.24□□□□□ -0.29
UBAP1-201ENST00000297661 PAX9P55771 341 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 TLE1Q04724 770 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 PRDX4Q13162 271 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 BATFQ16520 125 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 GAPTQ8N292 157 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 RPUSD4Q96CM3 377 aaKnown RBP13.23□□□□□ -0.29
UBAP1-201ENST00000297661 SDSLQ96GA7 329 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 MS4A10Q96PG2 267 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 PLA2G3Q9NZ20 509 aa13.23□□□□□ -0.29
UBAP1-201ENST00000297661 PTPRBP23467 1997 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms