RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 KLK11Q9UBX7 282 aa9.88□□□□□ -0.83
HMGB2-201ENST00000296503 DNAJC9-AS1A6NH13 148 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SLC33A1O00400 549 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 HSPB6O14558 160 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 NPFFO15130 113 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 HOXA3O43365 443 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 BCL2L11O43521 198 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 XRCC3O43542 346 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 S100A6P06703 90 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 FCER2P06734 321 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 ACTG1P63261 375 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 IL13RA2Q14627 380 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 AWAT2Q6E213 333 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 C12orf45Q8N5I9 185 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 C11orf42Q8N5U0 333 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 NKAIN3Q8N8D7 197 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SPATA3Q8NHX4 192 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SLC25A28Q96A46 364 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 ZNF714Q96N38 554 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SLITRK2Q9H156 845 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 IL36GQ9NZH8 169 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 AK6Q9Y3D8 172 aaKnown RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 LINC00312Q9Y6C7 94 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 KANTRA0A1W2PQU2 76 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 POM121CA8CG34 1229 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 C17orf98A8MV24 154 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 DISC1C4P0D8 188 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 GATCO43716 136 aaKnown RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 OR7C1O76099 320 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 GTF2F2P13984 249 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 COX7A1P24310 79 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 GLIPR1P48060 266 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 TAS2R20P59543 309 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 ATXN7L3Q14CW9 347 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SLC9A3R2Q15599 337 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 RNASE12Q5GAN4 147 aaKnown RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 KRBOX4Q5JUW0 171 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 Q6YL49 198 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 FOXRED1Q96CU9 486 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 GFI1Q99684 422 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
HMGB2-201ENST00000296503 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 PRDM13Q9H4Q3 707 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 ZFP57Q9NU63 452 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 TNFSF18Q9UNG2 199 aa9.87□□□□□ -0.83
HMGB2-201ENST00000296503 TRGV10A0A0A0MS01 117 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 TRAV14DV4A0A0A6YYC5 116 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 A0A1W2PP11 408 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 GEMIN2O14893 280 aaKnown RBP9.86□□□□□ -0.83
HMGB2-201ENST00000296503 FBP1P09467 338 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 RPL35P42766 123 aaKnown RBP9.86□□□□□ -0.83
HMGB2-201ENST00000296503 DLX6P56179 175 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 LGALS4P56470 323 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 ZNF546Q86UE3 836 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 LDLRAD3Q86YD5 345 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 PUSL1Q8N0Z8 303 aaKnown RBP9.86□□□□□ -0.83
HMGB2-201ENST00000296503 OR4D6Q8NGJ1 314 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 GCDHQ92947 438 aaPredicted RBP9.86□□□□□ -0.83
HMGB2-201ENST00000296503 C1orf147Q96MC9 270 aaPredicted RBP9.86□□□□□ -0.83
HMGB2-201ENST00000296503 ZNF251Q9BRH9 671 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 GINS4Q9BRT9 223 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 SEC11CQ9BY50 192 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 KIAA2026Q5HYC2 2103 aa9.86□□□□□ -0.83
HMGB2-201ENST00000296503 A0A0B4J203 849 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 CRTAPO75718 401 aaPredicted RBP9.85□□□□□ -0.83
HMGB2-201ENST00000296503 AKAIN1P0CW23 69 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 SAA4P35542 130 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 AKR1D1P51857 326 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 RBM11P57052 281 aaKnown RBP9.85□□□□□ -0.83
HMGB2-201ENST00000296503 TAF9Q16594 264 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 HCP5Q6MZN7 132 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 LRRTM1Q86UE6 522 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 OR13D1Q8NGV5 346 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 BANF2Q9H503 90 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 ZMAT3Q9HA38 289 aaKnown RBP9.85□□□□□ -0.83
HMGB2-201ENST00000296503 UBE2J1Q9Y385 318 aaPredicted RBP9.85□□□□□ -0.83
HMGB2-201ENST00000296503 ODAMA1E959 279 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 GOSR2O14653 212 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 SPDEFO95238 335 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 SIX6O95475 246 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 CSN2P05814 226 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 IGHV1-8P0DP01 117 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 CDK2P24941 298 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 RNF212Q495C1 297 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 MIDNQ504T8 468 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 LINC00596Q86U02 117 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 IZUMO1Q8IYV9 350 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 ZNF565Q8N9K5 539 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 SUMF2Q8NBJ7 301 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 NEK7Q8TDX7 302 aa9.85□□□□□ -0.83
HMGB2-201ENST00000296503 SSMEM1Q8WWF3 244 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms