RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ISG15P05161 165 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 DANCRP0C864 163 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 BCL3P20749 454 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 MRPL30Q8TCC3 161 aaKnown RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 CSPG4Q6UVK1 2322 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 OR10J4P0C629 311 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 ZNF735P0CB33 412 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 TPPP2P59282 170 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 INO80CQ6PI98 192 aaPredicted RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 TRDCB7Z8K6 153 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 F2RL2O00254 374 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 TSPAN2O60636 221 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 NDUFS6O75380 124 aaKnown RBP11.59□□□□□ -0.55
HPS3-201ENST00000296051 CEACAM3P40198 252 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 AMTP48728 403 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 C16orf82Q7Z2V1 217 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 PPP1R32Q7Z5V6 425 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 HES4Q9HCC6 221 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 SLC35D1Q9NTN3 355 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 A0A1W2PPE3 182 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 NPIPB9F8W1W9 429 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 GOSR1O95249 250 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
HPS3-201ENST00000296051 OR3A1P47881 315 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 OR5I1Q13606 314 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
HPS3-201ENST00000296051 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
HPS3-201ENST00000296051 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
HPS3-201ENST00000296051 SLC35B1P78383 322 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 P2RY6Q15077 328 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 VN1R17PQ8TDU5 208 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 OR5B21A6NL26 309 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 C11orf94C9JXX5 98 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 COX6A1P12074 109 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 EGR1P18146 543 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 PRRX1P54821 245 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 PLPPR5Q32ZL2 321 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 CBLN4Q9NTU7 201 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 IL36GQ9NZH8 169 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 MPC1Q9Y5U8 109 aa11.59□□□□□ -0.55
HPS3-201ENST00000296051 LOC102724200A0A096LPH7 203 aaPredicted RBP11.58□□□□□ -0.56
HPS3-201ENST00000296051 CTSSP25774 331 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 MDH2P40926 338 aaKnown RBP11.58□□□□□ -0.56
HPS3-201ENST00000296051 SNAI3Q3KNW1 292 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 RTBDNQ9BSG5 229 aaPredicted RBP11.58□□□□□ -0.56
HPS3-201ENST00000296051 OR2D2Q9H210 308 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 Q9N2K0 584 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 SIRT7Q9NRC8 400 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 DMRT1Q9Y5R6 373 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 NCOR2Q9Y618 2525 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 BRS3P32247 399 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 LSM6P62312 80 aaKnown RBP11.58□□□□□ -0.56
HPS3-201ENST00000296051 KHDC3LQ587J8 217 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 FDX2Q6P4F2 183 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 LINC00114Q6XXX2 140 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 LINC01560Q8TB33 94 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 SSMEM1Q8WWF3 244 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 ZDHHC8Q9ULC8 765 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 FCGR3BO75015 233 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 BCL2P10415 239 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 SMIM15Q7Z3B0 74 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 OR5D13Q8NGL4 314 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 ADIPOR1Q96A54 375 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 ANGPTL4Q9BY76 406 aa11.58□□□□□ -0.56
HPS3-201ENST00000296051 CRISP2P16562 243 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 TGIF2LXQ8IUE1 241 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 E9PQ18 207 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 RNF144BQ7Z419 303 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 CORO2AQ92828 525 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 OR2H1Q9GZK4 316 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 HEATR1Q9H583 2144 aaKnown RBP11.57□□□□□ -0.56
HPS3-201ENST00000296051 TOX4O94842 621 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 OR4A8P0C604 315 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 ADCYAP1P18509 176 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 TMEM38BQ9NVV0 291 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 RFNGQ9Y644 331 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 COLCA2A8K830 154 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 CYC1P08574 325 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 PAQR4Q8N4S7 273 aaPredicted RBP11.57□□□□□ -0.56
HPS3-201ENST00000296051 LRRC75AQ8NAA5 344 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 SMIM8Q96KF7 97 aa11.57□□□□□ -0.56
HPS3-201ENST00000296051 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
HPS3-201ENST00000296051 PCNX2A6NKB5 2137 aa11.56□□□□□ -0.56
HPS3-201ENST00000296051 SMAD7O15105 426 aaKnown RBP11.56□□□□□ -0.56
HPS3-201ENST00000296051 GYPAP02724 150 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms