RNA–Protein interactions for RNA: ENST00000295718.6

PTPRN-201, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRN, Length 3,784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-201ENST00000295718 IGHV5-10-1A0A0J9YXX1 117 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 A0A1W2PPB8 328 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 A0A1W2PRS3 328 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 KIR3DP1A8MWS1 328 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 TMEM183AQ8IXX5 376 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 ZNF441Q8N8Z8 693 aa12.38□□□□□ -0.43
PTPRN-201ENST00000295718 BOKQ9UMX3 212 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-201ENST00000295718 DUXBA0A1W2PPF3 345 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 OR7C2O60412 319 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 FCGR3BO75015 233 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 PMELP40967 661 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 IER3P46695 156 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 APOBEC3DQ96AK3 386 aaPredicted RBP12.37□□□□□ -0.43
PTPRN-201ENST00000295718 CFHR5Q9BXR6 569 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 SDF2L1Q9HCN8 221 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 EML5Q05BV3 1969 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 RHBDL1O75783 438 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 KMT5CQ86Y97 462 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 FGFRL1Q8N441 504 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 ABHD14BQ96IU4 210 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 NAT8BQ9UHF3 227 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 CACNA1BQ00975 2339 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 A0A1W2PQM1 296 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 TFF1P04155 84 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 DTD1Q8TEA8 209 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
PTPRN-201ENST00000295718 PLCE1Q9P212 2302 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 ZG16O60844 167 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 CER1O95813 267 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 OR4A8P0C604 315 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 CRISP2P16562 243 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 AMTP48728 403 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 LYPD6Q86Y78 171 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 ZNF664Q8N3J9 261 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 NFAM1Q8NET5 270 aaPredicted RBP12.36□□□□□ -0.43
PTPRN-201ENST00000295718 GALMQ96C23 342 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 A0A1B0GU03 582 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 A0A1W2PR77 199 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 NPIPB13A6NJU9 1138 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 NPIPB4C9JG80 1138 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 TCF21O43680 179 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 AESQ08117 197 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
PTPRN-201ENST00000295718 CHCHD2Q9Y6H1 151 aaPredicted RBP12.36□□□□□ -0.43
PTPRN-201ENST00000295718 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
PTPRN-201ENST00000295718 SH2D1BO14796 132 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 HRASP01112 189 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 FOXG1P55316 489 aaPredicted RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 ACSM6Q6P461 480 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 C10orf35Q96D05 121 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 EGLN1Q9GZT9 426 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CLCF1Q9UBD9 225 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 OBSL1O75147 1896 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 PIGBOS1A0A0B4J2F0 54 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 TIMM8AO60220 97 aaPredicted RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CCL1P22362 96 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 FOXO1Q12778 655 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 OR52L2PQ8NGH6 319 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CTDSP1Q9GZU7 261 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CEACAM18A8MTB9 384 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 H0Y980 276 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 SRFP11831 508 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 CBLN1P23435 193 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 RAB31Q13636 194 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 ZNF826PQ6ZT77 177 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 HIPK2Q9H2X6 1198 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 SRD5A3Q9H8P0 318 aa12.35□□□□□ -0.43
PTPRN-201ENST00000295718 EREGO14944 169 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 FGF12P61328 243 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 TFF3Q07654 80 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 KIAA1549LQ6ZVL6 1849 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 PATE3B3GLJ2 98 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 SYNGR3O43761 229 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 TPPP2P59282 170 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 GCSAMLQ5JQS6 135 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 PRR31Q5SQ13 230 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 Q6ZRM9 215 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 CPEB3Q8NE35 698 aaKnown RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 TMEM147Q9BVK8 224 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 TAAR3PQ9P1P4 343 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 CHD3Q12873 2000 aaKnown RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 UCP1P25874 307 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 TFPI2P48307 235 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 RPL23P62829 140 aaKnown RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 GTF3AQ92664 365 aaKnown RBP12.34□□□□□ -0.43
PTPRN-201ENST00000295718 BORCS7Q96B45 105 aa12.34□□□□□ -0.43
PTPRN-201ENST00000295718 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms