RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 IL36GQ9NZH8 169 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 CFIP05156 583 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 LINC00205P59089 165 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 FGF12P61328 243 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 TFF3Q07654 80 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF816Q0VGE8 651 aaPredicted RBP10.96□□□□□ -0.66
COL8A1-202ENST00000273342 PCOLCEQ15113 449 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 GCSAMLQ5JQS6 135 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF808Q8N4W9 903 aaPredicted RBP10.96□□□□□ -0.66
COL8A1-202ENST00000273342 OR10G9Q8NGN4 311 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 OR10G7Q8NGN6 311 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 OR10D3Q8NH80 312 aa10.96□□□□□ -0.66
COL8A1-202ENST00000273342 IGHV5-10-1A0A0J9YXX1 117 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 TGOLN2O43493 480 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 HRASP01112 189 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 PDGFBP01127 241 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-202ENST00000273342 SELEP16581 610 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 SSR4P51571 173 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF324BQ6AW86 544 aaPredicted RBP10.95□□□□□ -0.66
COL8A1-202ENST00000273342 ABLIM2Q6H8Q1 611 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 GPR35Q9HC97 309 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 CACNA1GO43497 2377 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 B4E171 279 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 GCGP01275 180 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 TSPAN7P41732 249 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 RNASEH2CQ8TDP1 164 aaKnown RBP10.95□□□□□ -0.66
COL8A1-202ENST00000273342 P2RX4Q99571 388 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 GCH1P30793 250 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 G6PCP35575 357 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 MPLP40238 635 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 CLDN15P56746 228 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 RAC3P60763 192 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 FFAR4Q5NUL3 377 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 RPS19BP1Q86WX3 136 aaKnown RBP10.95□□□□□ -0.66
COL8A1-202ENST00000273342 CPT1CQ8TCG5 803 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 TMEM170AQ8WVE7 144 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 ZDHHC16Q969W1 377 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 ABHD14BQ96IU4 210 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 TRAPPC1Q9Y5R8 145 aa10.95□□□□□ -0.66
COL8A1-202ENST00000273342 TRAV24A0A0B4J272 114 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF503-AS2A6NEH8 195 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF716A6NP11 495 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 RAMP3O60896 148 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 PAX1P15863 534 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
COL8A1-202ENST00000273342 ARF1P84077 181 aaKnown RBP10.94□□□□□ -0.66
COL8A1-202ENST00000273342 DBX2Q6ZNG2 339 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 KMT5CQ86Y97 462 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 DNASE2BQ8WZ79 361 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 TMEM68Q96MH6 324 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 IMMP2LQ96T52 175 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 POLR3KQ9Y2Y1 108 aaPredicted RBP10.94□□□□□ -0.66
COL8A1-202ENST00000273342 CEP250Q9BV73 2442 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 SERF2P84101 59 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 IQCJQ1A5X6 159 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF585BQ52M93 769 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 MCEMP1Q8IX19 187 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 FGFRL1Q8N441 504 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 MS4A10Q96PG2 267 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 TRAPPC2LQ9UL33 140 aa10.94□□□□□ -0.66
COL8A1-202ENST00000273342 DUXBA0A1W2PPF3 345 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 M0R143 59 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 NPPCP23582 126 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 IL3RAP26951 378 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 PLPPR2Q96GM1 343 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 PATZ1Q9HBE1 687 aaKnown RBP10.93□□□□□ -0.66
COL8A1-202ENST00000273342 OR6C3Q9NZP0 311 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 SPTBN2O15020 2390 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 TRAV38-1A0A0B4J264 116 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 CBR3O75828 277 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 FKBP2P26885 142 aaKnown RBP10.93□□□□□ -0.66
COL8A1-202ENST00000273342 CEACAM6P40199 344 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 THBS3P49746 956 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 LBHQ53QV2 105 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-202ENST00000273342 DNLZQ5SXM8 178 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 TOMM20LQ6UXN7 152 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF114Q8NC26 417 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 PAM16Q9Y3D7 125 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 C11orf94C9JXX5 98 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 NDUFB4O95168 129 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 IGLV2-14P01704 120 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 SRFP11831 508 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 CCL4P13236 92 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 CA6P23280 308 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 ATP5G3P48201 142 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 PSMG3Q9BT73 122 aaPredicted RBP10.93□□□□□ -0.66
COL8A1-202ENST00000273342 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 DLL3Q9NYJ7 618 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 SEMA5BQ9P283 1151 aa10.93□□□□□ -0.66
COL8A1-202ENST00000273342 MED12LQ86YW9 2145 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 TFF1P04155 84 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 UMODP07911 640 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 NPSP0C0P6 89 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-202ENST00000273342 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms