RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 EMC6Q9BV81 110 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 HSPB7Q9UBY9 170 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 UQCR10Q9UDW1 63 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 FRYQ5TBA9 3013 aa7.5□□□□□ -1.21
VAPB-201ENST00000265619 NCOA6Q14686 2063 aaPredicted RBP7.49□□□□□ -1.21
VAPB-201ENST00000265619 RBFOX2O43251 390 aaKnown RBP eCLIP7.49□□□□□ -1.218e-6■■□□□ 11.5
VAPB-201ENST00000265619 SERPINA7P05543 415 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PNMTP11086 282 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ZNF823P16415 610 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 FAHP16930 419 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 IL12BP29460 328 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 BATF2Q8N1L9 274 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 FLVCR1-AS1Q8TAF5 88 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 SSC4DQ8WTU2 575 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 RNF133Q8WVZ7 376 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ST6GALNAC6Q969X2 333 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PLK3Q9H4B4 646 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ZNF286AQ9HBT8 521 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PRTFDC1Q9NRG1 225 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 TMEM265A0A087WTH1 108 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 LMO7DNF2Z398 122 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ANGPTL7O43827 346 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 TNFSF4P23510 183 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
VAPB-201ENST00000265619 TLE3Q04726 772 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 KISS1Q15726 138 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 HLA-BQ31612 363 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 RPP25LQ8N5L8 163 aaKnown RBP7.49□□□□□ -1.21
VAPB-201ENST00000265619 OR4F5Q8NH21 305 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 NT5CQ8TCD5 201 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 MBD3L1Q8WWY6 194 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PIGTQ969N2 578 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 FAM131CQ96AQ9 280 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 OR4F4Q96R69 305 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ELOVL5Q9NYP7 299 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 RALGAPA1Q6GYQ0 2036 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 G3V3Y1 287 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 K7ESF4 209 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 DUX1O43812 170 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 CRYAAP02489 173 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 CDAP32320 146 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 RELBQ01201 579 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 MRGPRGQ86SM5 289 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
VAPB-201ENST00000265619 OR4F17Q8NGA8 305 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 C11orf40Q8WZ69 217 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 TMEM56Q96MV1 263 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 DGAT2Q96PD7 388 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 P2RX4Q99571 388 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 ZDHHC11Q9H8X9 412 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PLSCR4Q9NRQ2 329 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 PLEKHJ1Q9NW61 149 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 R4GN57 208 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 TMEM56-RWDD3S4R434 201 aa7.49□□□□□ -1.21
VAPB-201ENST00000265619 COL4A2P08572 1712 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 MUC6Q6W4X9 2439 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 A0A1W2PRS3 328 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 MDH2P40926 338 aaKnown RBP7.48□□□□□ -1.21
VAPB-201ENST00000265619 ZNF468Q5VIY5 522 aaPredicted RBP7.48□□□□□ -1.21
VAPB-201ENST00000265619 C16orf47Q6ZP98 133 aaPredicted RBP7.48□□□□□ -1.21
VAPB-201ENST00000265619 SLC38A9Q8NBW4 561 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 OR4B1Q8NGF8 309 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TXNIPQ9H3M7 391 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 SLC25A22Q9H936 323 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TAAR3PQ9P1P4 343 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
VAPB-201ENST00000265619 LHFPL6Q9Y693 200 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 CEP192Q8TEP8 1941 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 C3orf85A0A1B0GTC6 90 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 SYNGR4O95473 234 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 THBS3P49746 956 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 MFAP5Q13361 173 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 SNAI3Q3KNW1 292 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 PRAMEF20Q5VT98 475 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 LHFPL2Q6ZUX7 228 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 OR5P3Q8WZ94 311 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TM2D1Q9BX74 207 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 FGF21Q9NSA1 209 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 ZNF407Q9C0G0 2248 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TMEM131Q92545 1883 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 IGLC7A0M8Q6 106 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 CLEC18AA5D8T8 446 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 PRR19A6NJB7 356 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 OR5B21A6NL26 309 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 C22orf46C9J442 243 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 TAX1BP3O14907 124 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 ZNF121P58317 390 aaPredicted RBP7.48□□□□□ -1.21
VAPB-201ENST00000265619 ZIC4Q8N9L1 334 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 CLEC18CQ8NCF0 446 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 SGMS2Q8NHU3 365 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 LHX4Q969G2 390 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
VAPB-201ENST00000265619 HS3ST1O14792 307 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 SRP14P37108 136 aaKnown RBP7.47□□□□□ -1.21
VAPB-201ENST00000265619 MPLP40238 635 aa7.47□□□□□ -1.21
VAPB-201ENST00000265619 NSDHLQ15738 373 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms