RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 FAM78BQ5VT40 261 aa13.81□□□□□ -0.2
PDZRN3-201ENST00000263666 FOXJ2Q9P0K8 574 aa13.81□□□□□ -0.2
PDZRN3-201ENST00000263666 NKX2-8O15522 239 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 OR2H2O95918 312 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 C18orf12Q96KH6 178 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 BCL2P10415 239 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 LINC00205P59089 165 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 ZNF705AQ6ZN79 300 aaPredicted RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 ACTR3CQ9C0K3 210 aaPredicted RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 RIMS4Q9H426 269 aaPredicted RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 FOXD3Q9UJU5 478 aaPredicted RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 PQLC2LA1A4F0 135 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 ZNF716A6NP11 495 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 CELA3BP08861 270 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 OR8U8P0C7N1 319 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 COX5AP20674 150 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 TIPARPQ7Z3E1 657 aaKnown RBP13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 OR2Z1Q8NG97 314 aa13.8□□□□□ -0.2
PDZRN3-201ENST00000263666 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 MDFIC2A0A1B0GVS7 189 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 ZNF891A8MT65 544 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 ACP1P24666 158 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 G0S2P27469 103 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 FAM53AQ6NSI3 398 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 VKORC1L1Q8N0U8 176 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 OR5A2Q8NGI9 324 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 SARAFQ96BY9 339 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 ZNF71Q9NQZ8 489 aaPredicted RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 TUBG2Q9NRH3 451 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 K7N7A8 449 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 SPINT2O43291 252 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 PLA2G5P39877 138 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 DCTN5Q9BTE1 182 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 FAM103A1Q9BTL3 118 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 C16orf82Q7Z2V1 217 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 FGFRL1Q8N441 504 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 NDUFA2O43678 99 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 MGST1P10620 155 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 GAMTQ14353 236 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 PINX1Q96BK5 328 aaKnown RBP13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 PCGF1Q9BSM1 259 aa13.79□□□□□ -0.2
PDZRN3-201ENST00000263666 IGHV3OR15-7A0A075B7D8 119 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 TMEM50AO95807 157 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 B2MP61769 119 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 KCNIP4Q6PIL6 250 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 MUCL1Q96DR8 90 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 TECTBQ96PL2 329 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 A0A087X0M5 115 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 A0A1B0GX30 115 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 ERVFRD-1P60508 538 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 FOXO1Q12778 655 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 HIST3H3Q16695 136 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 C20orf204Q6ZNR8 217 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 RCC1LQ96I51 464 aaKnown RBP13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 TRAV38-1A0A0B4J264 116 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 SPRY3O43610 288 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 ZNF883P0CG24 379 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 GNG10P50151 68 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 HTD2P86397 168 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 OR8B8Q15620 311 aa13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 MUC22E2RYF6 1773 aaPredicted RBP13.78□□□□□ -0.2
PDZRN3-201ENST00000263666 SEC14L6B5MCN3 397 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 ZG16O60844 167 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 RBPJQ06330 500 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 BAGE3Q86Y29 109 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 BAGE2Q86Y30 109 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 DTD1Q8TEA8 209 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 OR51M1Q9H341 326 aa13.77□□□□□ -0.2
PDZRN3-201ENST00000263666 C5orf52A6NGY3 159 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 CTSSP25774 331 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 ICAM4Q14773 271 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 GGNQ86UU5 652 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 IGLV3-32A0A0A0MS00 114 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 TMEM30CPA0ZSE6 113 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 H0Y980 276 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 J3QT63 122 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 HAND1O96004 215 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 KITLGP21583 273 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 THBS3P49746 956 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 KHDC3LQ587J8 217 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 IL22RA2Q969J5 263 aa13.77□□□□□ -0.21
PDZRN3-201ENST00000263666 OR5B21A6NL26 309 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 C17orf112F2Z3M2 114 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 SOX8P57073 446 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 DDA1Q9BW61 102 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 METTL1Q9UBP6 276 aaKnown RBP13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 VAX2Q9UIW0 290 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 Q0VFX4 171 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 SCCPDHQ8NBX0 429 aa13.76□□□□□ -0.21
PDZRN3-201ENST00000263666 OR4D5Q8NGN0 318 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms