RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SCCPDHQ8NBX0 429 aa7.72□□□□□ -1.17
MSH4-201ENST00000263187 DCTN5Q9BTE1 182 aa7.72□□□□□ -1.17
MSH4-201ENST00000263187 IER2Q9BTL4 223 aa7.72□□□□□ -1.17
MSH4-201ENST00000263187 ELOVL1Q9BW60 279 aa7.72□□□□□ -1.17
MSH4-201ENST00000263187 SLC39A9Q9NUM3 307 aa7.72□□□□□ -1.17
MSH4-201ENST00000263187 C9orf172C9J069 976 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 ZNF737O75373 536 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 HNF1AP20823 631 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 UBE2G2P60604 165 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 ZNF573Q86YE8 665 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 DRAM1Q8N682 238 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 SMIM7Q9BQ49 75 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 FAM173AQ9BQD7 235 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 OR2D2Q9H210 308 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 KALRNO60229 2985 aa7.71□□□□□ -1.17
MSH4-201ENST00000263187 PIEZO2Q9H5I5 2752 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 A0A1W2PNU3 283 aaPredicted RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 DFFBO76075 338 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 IL18BPO95998 194 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 CRYAAP02489 173 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 MDH2P40926 338 aaKnown RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 ARG2P78540 354 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 SLC38A11Q08AI6 406 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 RPP25LQ8N5L8 163 aaKnown RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 MRGPRDQ8TDS7 321 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 SDSLQ96GA7 329 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 ABHD14BQ96IU4 210 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 TECTBQ96PL2 329 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 COL25A1Q9BXS0 654 aaPredicted RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 OBP2BQ9NPH6 170 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 B4GALT7Q9UBV7 327 aa7.71□□□□□ -1.18
MSH4-201ENST00000263187 TPRP12270 2363 aaKnown RBP7.71□□□□□ -1.18
MSH4-201ENST00000263187 PSPNO60542 156 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 HBE1P02100 147 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 TFF3Q07654 80 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 GCSAMLQ5JQS6 135 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 MALSU1Q96EH3 234 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 ARRDC1-AS1Q9H2J1 176 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 LAMP3Q9UQV4 416 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 POLEQ07864 2286 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 HEATR1Q9H583 2144 aaKnown RBP7.7□□□□□ -1.18
MSH4-201ENST00000263187 A0A1B0GU03 582 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 A0A1W2PPQ1 181 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 BTBD17A6NE02 478 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 M0R296 226 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 CER1O95813 267 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 CTXN2P0C2S0 81 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 TDGF1P13385 188 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 HOXB1P14653 301 aaPredicted RBP7.7□□□□□ -1.18
MSH4-201ENST00000263187 MEOX1P50221 254 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 LRP11Q86VZ4 500 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 C1orf87Q8N0U7 546 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 OR4F5Q8NH21 305 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 CA5BP1Q8WTZ4 195 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 OR4F4Q96R69 305 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 RAB40CQ96S21 281 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 OR51I2Q9H344 312 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 ZMAT5Q9UDW3 170 aaKnown RBP7.7□□□□□ -1.18
MSH4-201ENST00000263187 TACC2O95359 2948 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 A0A0U1RQK1 487 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 ZG16O60844 167 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 GABRA2P47869 451 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 EDDM3AQ14507 147 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 RNFT1Q5M7Z0 435 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 Q6P435 159 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 ACSM6Q6P461 480 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 TMEM37Q8WXS4 190 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 MEGF10Q96KG7 1140 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 MSL2Q9HCI7 577 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 ARFGEF3Q5TH69 2177 aa7.7□□□□□ -1.18
MSH4-201ENST00000263187 A0A1B0GW64 132 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 SMCO3A2RU48 225 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 S1PR2O95136 353 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 SSTR5P35346 364 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 TRA2AQ13595 282 aaKnown RBP eCLIP7.69□□□□□ -1.18
MSH4-201ENST00000263187 DCAF10Q5QP82 559 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 PRAMEF6Q5VXH4 476 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 C16orf82Q7Z2V1 217 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 VKORC1L1Q8N0U8 176 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 HIST3H2BBQ8N257 126 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 CNEP1R1Q8N9A8 125 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 OR51G1Q8NGK1 321 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 TMEM9BQ9NQ34 198 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 METRNQ9UJH8 293 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 OR5H1A6NKK0 313 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 ZNF705GA8MUZ8 300 aaPredicted RBP7.69□□□□□ -1.18
MSH4-201ENST00000263187 C17orf98A8MV24 154 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 CLDN34H7C241 214 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 PHOX2AO14813 284 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 IL2RGP31785 369 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 CHRNA7P36544 502 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 ARR3P36575 388 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 FABP6P51161 128 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 HBG1P69891 147 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 HBG2P69892 147 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 P2RY6Q15077 328 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 SLC35E3Q7Z769 313 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 Q8NFD4 153 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms