RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 NDUFB4O95168 129 aa11.22□□□□□ -0.61
TTC39A-202ENST00000262676 RBM11P57052 281 aaKnown RBP11.22□□□□□ -0.61
TTC39A-202ENST00000262676 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
TTC39A-202ENST00000262676 LINC01555Q8NAE3 123 aa11.22□□□□□ -0.61
TTC39A-202ENST00000262676 C11orf68Q9H3H3 251 aaKnown RBP11.22□□□□□ -0.61
TTC39A-202ENST00000262676 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
TTC39A-202ENST00000262676 LAMB1P07942 1786 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 MPDU1O75352 247 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 PPYP01298 95 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 SMIM13P0DJ93 91 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 PSG6Q00889 435 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 METTL26Q96S19 204 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 IL19Q9UHD0 177 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 PF4V1P10720 104 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 SLC52A3Q9NQ40 469 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 SS18L1O75177 396 aaPredicted RBP11.21□□□□□ -0.61
TTC39A-202ENST00000262676 PITX3O75364 302 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 GALP22466 123 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 FXYD3Q14802 87 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 SAP30LQ9HAJ7 183 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 FOXJ2Q9P0K8 574 aa11.21□□□□□ -0.61
TTC39A-202ENST00000262676 TSPAN2O60636 221 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 OR2A4O95047 310 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 CYB5R3P00387 301 aaPredicted RBP11.21□□□□□ -0.62
TTC39A-202ENST00000262676 PLAUP00749 431 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 DDTP30046 118 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 ACVR1Q04771 509 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 ABHD14BQ96IU4 210 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 OR2A7Q96R45 310 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 SCN4AP35499 1836 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 ASPDHA6ND91 283 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM210A6NLX4 147 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 CDIPTO14735 213 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 AMY1AP04745 511 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 MUC1P15941 1255 aaPredicted RBP11.21□□□□□ -0.62
TTC39A-202ENST00000262676 PMCHL1Q16048 86 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 UNQ9370/PRO34162Q6UXP9 181 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM183AQ8IXX5 376 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 AMER3Q8N944 861 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 ASB10Q8WXI3 467 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 MAP1LC3AQ9H492 121 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 GPR35Q9HC97 309 aa11.21□□□□□ -0.62
TTC39A-202ENST00000262676 FFAR1O14842 300 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 RECKO95980 971 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 CTLA4P16410 223 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 GAB4Q2WGN9 574 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 KLK2P20151 261 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 GMPPAQ96IJ6 420 aaPredicted RBP11.2□□□□□ -0.62
TTC39A-202ENST00000262676 MRM2Q9UI43 246 aaKnown RBP11.2□□□□□ -0.62
TTC39A-202ENST00000262676 J3QR06 171 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 ARF6P62330 175 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 RUNX1Q01196 453 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 LY6DQ14210 128 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 CSRP2Q16527 193 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 NUDT16L1Q9BRJ7 211 aaKnown RBP11.2□□□□□ -0.62
TTC39A-202ENST00000262676 HSPB7Q9UBY9 170 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 MARF1Q9Y4F3 1742 aaKnown RBP11.2□□□□□ -0.62
TTC39A-202ENST00000262676 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 SCAND1P57086 179 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 SH2D5Q6ZV89 423 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 V9GYH0 126 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 A8MWL6 223 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 WNT2BQ93097 391 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 CA10Q9NS85 328 aa11.2□□□□□ -0.62
TTC39A-202ENST00000262676 CTDSPLO15194 276 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 VDAC1P21796 283 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 NUBP1P53384 320 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 ZNF324BQ6AW86 544 aaPredicted RBP11.19□□□□□ -0.62
TTC39A-202ENST00000262676 STXBP6Q8NFX7 210 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 FRRS1LQ9P0K9 344 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 PLXNB2O15031 1838 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 LHFPL5Q8TAF8 219 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 PRSS27Q9BQR3 290 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
TTC39A-202ENST00000262676 TNS1Q9HBL0 1735 aaKnown RBP11.19□□□□□ -0.62
TTC39A-202ENST00000262676 PRR33A8MZF0 331 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 RPL34P49207 117 aaKnown RBP11.19□□□□□ -0.62
TTC39A-202ENST00000262676 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 PXMP4Q9Y6I8 212 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 TRPM6Q9BX84 2022 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 HYPMO75409 117 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 PNLIPP16233 465 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 SSTR5P35346 364 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 OPN4Q9UHM6 478 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
TTC39A-202ENST00000262676 SYNGR1O43759 233 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 CELA2AP08217 269 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 BCL2P10415 239 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 MMDQ15546 238 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 OR1L8Q8NGR8 309 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 VSTM2LQ96N03 204 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
TTC39A-202ENST00000262676 A0A1B0GU03 582 aa11.18□□□□□ -0.62
TTC39A-202ENST00000262676 FXYD1O00168 92 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms