RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SMIM10Q96HG1 83 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SIRT4Q9Y6E7 314 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 IGLV1-36A0A0B4J1U3 117 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 A0A1W2PQM1 296 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM189A5PLL7 270 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 PPIAL4GP0DN37 164 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 CXCL3P19876 107 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 MRGPRGQ86SM5 289 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SAXO1Q8IYX7 474 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 GUCD1Q96NT3 240 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SMAD7O15105 426 aaKnown RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 CSRP2Q16527 193 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 LY6EQ16553 131 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SPANXN1Q5VSR9 72 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 IGHV1-69-2A0A0G2JMI3 117 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 NDUFA2O43678 99 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 UNQ5815/PRO19632Q6UWF5 114 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF841Q6ZN19 808 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 OR4A5Q8NH83 315 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF735P0CB33 412 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 CRISP2P16562 243 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 ELOBQ15370 118 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 TGIF1Q15583 401 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 GTF2H5Q6ZYL4 71 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 SELENOHQ8IZQ5 122 aaKnown RBP7.51□□□□□ -1.21
PTCD3-201ENST00000254630 DUX5Q96PT3 197 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 CALYQ9NYX4 217 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 LHFPL6Q9Y693 200 aa7.51□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A10PA6NDY2 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A18PA6NE21 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A16PA6NEW6 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A20PA6NIJ5 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A8PA6NJQ4 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A7PA6NKC0 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A22PA8MWA6 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A12PA8MX19 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A5PA8MXJ8 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A23PA8MXZ1 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A15PP0C7V4 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A13PP0C7W8 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A14PP0C7W9 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM90A24PP0C7X0 464 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 RCC1P18754 421 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-201ENST00000254630 PSG9Q00887 426 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 COX19Q49B96 90 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 RNFT1Q5M7Z0 435 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 KLF14Q8TD94 323 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-201ENST00000254630 ST6GAL2Q96JF0 529 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 LOC389332A0A1B0GUA5 103 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 CORTO00230 105 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 CD40P25942 277 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 GDF15Q99988 308 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 A0A1W2PR77 199 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 KCNAB3O43448 404 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 PGA5P0DJD9 388 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 MPV17P39210 176 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 ATP5J2P56134 94 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 VAX1Q5SQQ9 334 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 OR8A1Q8NGG7 326 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 CHAC2Q8WUX2 184 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 AQP3Q92482 292 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 SCMH1Q96GD3 660 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 MTCL1Q9Y4B5 1905 aaKnown RBP7.5□□□□□ -1.21
PTCD3-201ENST00000254630 NUMA1Q14980 2115 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF345Q14585 488 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 FAM209AQ5JX71 171 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 WNT5BQ9H1J7 359 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 PGLYRP1O75594 196 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-201ENST00000254630 TIAF1O95411 115 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 OVCH2Q7RTZ1 564 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 OR2D3Q8NGH3 330 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 SIRT7Q9NRC8 400 aa7.5□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF646O15015 1829 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-201ENST00000254630 HAX1O00165 279 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 COX5BP10606 129 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 IER3P46695 156 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 NPVFQ9HCQ7 196 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 LRRC75BQ2VPJ9 315 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 LGALSLQ3ZCW2 172 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 HSD17B13Q7Z5P4 300 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 TMEM191AQ9H0A3 160 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 H3BQ15 152 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 IGLV3-21P80748 117 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-201ENST00000254630 ZNF79Q15937 498 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 HCP5Q6MZN7 132 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 ABHD12Q8N2K0 398 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 NUP37Q8NFH4 326 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 LINC01560Q8TB33 94 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 AMELYQ99218 206 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 DCTN5Q9BTE1 182 aa7.49□□□□□ -1.21
PTCD3-201ENST00000254630 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms