RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF826PQ6ZT77 177 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 MED12LQ86YW9 2145 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 NINJ1Q92982 152 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 OR2D2Q9H210 308 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 OBP2BQ9NPH6 170 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 ATP23Q9Y6H3 246 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF503-AS2A6NEH8 195 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 RAMP3O60896 148 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 CA11O75493 328 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 FGF12P61328 243 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 ODF3L1Q8IXM7 274 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 MALSU1Q96EH3 234 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 TMEM56Q96MV1 263 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 FAM103A1Q9BTL3 118 aaKnown RBP10.18□□□□□ -0.78
USHBP1-201ENST00000252597 FGF23Q9GZV9 251 aaPredicted RBP10.18□□□□□ -0.78
USHBP1-201ENST00000252597 PARLQ9H300 379 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 TMEM56-RWDD3S4R434 201 aa10.18□□□□□ -0.78
USHBP1-201ENST00000252597 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 A0A1B0GU03 582 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 TCAPO15273 167 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 IGLV3-1P01715 115 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 AMBPP02760 352 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 SLC35B1P78383 322 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 TFF3Q07654 80 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 ALKBH6Q3KRA9 238 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 TCF23Q7RTU1 214 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 C10orf35Q96D05 121 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 ABHD14BQ96IU4 210 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 RAB40CQ96S21 281 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 SDF2L1Q9HCN8 221 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 DLL3Q9NYJ7 618 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 CPAMD8Q8IZJ3 1885 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 A0A1W2PPV4 95 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 RAC2P15153 192 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 MAGEA5P43359 124 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 UCP3P55916 312 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 MEF2BQ02080 365 aaPredicted RBP10.17□□□□□ -0.78
USHBP1-201ENST00000252597 H1FOOQ8IZA3 346 aaPredicted RBP10.17□□□□□ -0.78
USHBP1-201ENST00000252597 FGFRL1Q8N441 504 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 RPP25LQ8N5L8 163 aaKnown RBP10.17□□□□□ -0.78
USHBP1-201ENST00000252597 DMXL2Q8TDJ6 3036 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 MRGPRDQ8TDS7 321 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 APH1AQ96BI3 265 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 DUSP23Q9BVJ7 150 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF716A6NP11 495 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 ZG16O60844 167 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 OR52L2PQ8NGH6 319 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 OR1P1Q8NH06 330 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 DECR2Q9NUI1 292 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 PITPNC1Q9UKF7 332 aa10.17□□□□□ -0.78
USHBP1-201ENST00000252597 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 H0Y980 276 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 IGKV1D-33P01593 117 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 IGKV1-33P01594 117 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OPN1MWP04001 364 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OR4A8P0C604 315 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OPN1MW2P0DN77 364 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OPN1MW3P0DN78 364 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 MPLP40238 635 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 PMELP40967 661 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 AESQ08117 197 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 PRR31Q5SQ13 230 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 VKORC1L1Q8N0U8 176 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 ZNF525Q8N782 197 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 TAF15Q92804 592 aaKnown RBP eCLIP10.16□□□□□ -0.78
USHBP1-201ENST00000252597 KLF7O75840 302 aaPredicted RBP10.16□□□□□ -0.78
USHBP1-201ENST00000252597 GZMHP20718 246 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 FKBP2P26885 142 aaKnown RBP10.16□□□□□ -0.78
USHBP1-201ENST00000252597 GNB2P62879 340 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 ARG2P78540 354 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
USHBP1-201ENST00000252597 REC114Q7Z4M0 266 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 OR1L1Q8NH94 360 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 M1APQ8TC57 530 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 IL17BQ9UHF5 180 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 APC2O95996 2303 aa10.16□□□□□ -0.78
USHBP1-201ENST00000252597 TRAV24A0A0B4J272 114 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 IGKV1-5P01602 117 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 GYPAP02724 150 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 SLC25A6P12236 298 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 SRD5A2P31213 254 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 MRGPRGQ86SM5 289 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 C1QL4Q86Z23 238 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 OR5D13Q8NGL4 314 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 SSMEM1Q8WWF3 244 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 ELOA3CA0A087WX78 387 aaPredicted RBP10.15□□□□□ -0.78
USHBP1-201ENST00000252597 IGLV3-32A0A0A0MS00 114 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 WNT9BO14905 357 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 NDUFB4O95168 129 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 ABHD17BQ5VST6 288 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 ACSM6Q6P461 480 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 GGNQ86UU5 652 aa10.15□□□□□ -0.78
USHBP1-201ENST00000252597 OR2Y1Q8NGV0 311 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms