RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ZNRF1Q8ND25 227 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 OR13A1Q8NGR1 328 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 GALMQ96C23 342 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 TCEAL7Q9BRU2 100 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 PLEKHA2Q9HB19 425 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 RFNGQ9Y644 331 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 TAAR5O14804 337 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IGHV3-13P01766 116 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 HBZP02008 142 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IL2RGP31785 369 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 GLRXP35754 106 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 PPP1CCP36873 323 aaKnown RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 CLINT1Q14677 625 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 ZNF808Q8N4W9 903 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 DRAM1Q8N682 238 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 GCSAMQ8N6F7 178 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 MRPL37Q9BZE1 423 aaKnown RBP12.34□□□□□ -0.43
MBD4-201ENST00000249910 TMEM231Q9H6L2 316 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 KCNIP1Q9NZI2 227 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 TACC2O95359 2948 aa12.34□□□□□ -0.43
MBD4-201ENST00000249910 IGKV1D-17A0A075B6S4 117 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 H3BP45 60 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 AGPAT2O15120 278 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 JTBO76095 146 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 TUBG1P23258 451 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 PRDX2P32119 198 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 C9orf152Q5JTZ5 239 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
MBD4-201ENST00000249910 TMEM217Q8N7C4 229 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 OR5D13Q8NGL4 314 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 CA5BP1Q8WTZ4 195 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 SEBOXQ9HB31 216 aaPredicted RBP12.33□□□□□ -0.44
MBD4-201ENST00000249910 TUBG2Q9NRH3 451 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 NPIPB11E5RHQ5 1161 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 K7ENP7 123 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 CST7O76096 145 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 LPAR6P43657 344 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 FHITP49789 147 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 RNF212Q495C1 297 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 OR2C3Q8N628 320 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 HSD17B11Q8NBQ5 300 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 RNASE11Q8TAA1 199 aaKnown RBP12.33□□□□□ -0.44
MBD4-201ENST00000249910 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
MBD4-201ENST00000249910 CHST1O43916 411 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 MED6O75586 246 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 C1QL1O75973 258 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 CD40P25942 277 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 S100GP29377 79 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 MST1LQ2TV78 715 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 ITLN1Q8WWA0 313 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 GPR146Q96CH1 333 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 OR2D2Q9H210 308 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 A0A1B0GW55 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 IGSF23A1L1A6 192 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 GPR137BO60478 399 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 RAMP3O60896 148 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L2P0CJ85 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L3P0CJ86 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L4P0CJ87 422 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L5P0CJ88 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L6P0CJ89 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L7P0CJ90 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 P2RY1P47900 373 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
MBD4-201ENST00000249910 BTNL3Q6UXE8 466 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 ARL11Q969Q4 196 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 NKX6-2Q9C056 277 aaPredicted RBP12.32□□□□□ -0.44
MBD4-201ENST00000249910 DUX4Q9UBX2 424 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
MBD4-201ENST00000249910 SRRM5B3KS81 715 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 ID3Q02535 119 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 SLC35E4Q6ICL7 350 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 WFDC8Q8IUA0 241 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 C5orf30Q96GV9 206 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 MEGF10Q96KG7 1140 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 DCHS2Q6V1P9 2916 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 OOEPA6NGQ2 149 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 TCAPO15273 167 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 LY86O95711 162 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 MUC1P15941 1255 aaPredicted RBP12.31□□□□□ -0.44
MBD4-201ENST00000249910 RAB4AP20338 218 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
MBD4-201ENST00000249910 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 DEFB108BQ8NET1 73 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 PIGMQ9H3S5 423 aa12.31□□□□□ -0.44
MBD4-201ENST00000249910 CACNG5Q9UF02 275 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms