RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 WFDC1Q9HC57 220 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 PILRAQ9UKJ1 303 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 SF3B6Q9Y3B4 125 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 MRPS18BQ9Y676 258 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 ASXL3Q9C0F0 2248 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 TSPAN2O60636 221 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 KIR3DL2P43630 455 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 IFITM3Q01628 133 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 PSG5Q15238 335 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ZNF658BQ4V348 819 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 C9orf40Q8IXQ3 194 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 BLNKQ8WV28 456 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 GTF3AQ92664 365 aaKnown RBP3.84□□□□□ -1.79
CHD9-201ENST00000219084 DEFB127Q9H1M4 99 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 TMEM242Q9NWH2 141 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ONECUT1Q9UBC0 465 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 NACAE9PAV3 2078 aa3.84□□□□□ -1.79
CHD9-201ENST00000219084 ZNF716A6NP11 495 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 ZNF146Q15072 292 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 SLC23A3Q6PIS1 610 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 REC114Q7Z4M0 266 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 TMEM251Q8N6I4 163 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 Q96M66 194 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 RSG1Q9BU20 258 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 RNF7Q9UBF6 113 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 C2CD4DB7Z1M9 353 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 DLL1O00548 723 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 NPBWR2P48146 333 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 SGMS2Q8NHU3 365 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 CTHRC1Q96CG8 243 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 ADAT3Q96EY9 351 aaPredicted RBP3.84□□□□□ -1.8
CHD9-201ENST00000219084 GALNT14Q96FL9 552 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 FAM206AQ9NX38 181 aa3.84□□□□□ -1.8
CHD9-201ENST00000219084 A0A0B4J293 547 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SH2D7A6NKC9 451 aaPredicted RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 KLF4O43474 513 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 UPK3AO75631 287 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 S1PR2O95136 353 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 RPS27P42677 84 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 NANOS3P60323 173 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 MRGPRFQ96AM1 343 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 PAXXQ9BUH6 204 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SCNM1Q9BWG6 230 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 LHX9Q9NQ69 397 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SNURFLB1AK76 121 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 TTRP02766 147 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 TMIGD3P0DMS9 266 aaPredicted RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 TWIST1Q15672 202 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 IGSF11Q5DX21 431 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 LYZL2Q7Z4W2 148 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 C1QL4Q86Z23 238 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 C5orf17Q8NAS9 161 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 POC1AQ8NBT0 407 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 TMEM116Q8NCL8 245 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SPSB4Q96A44 273 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 QTRT1Q9BXR0 403 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 TCFL5Q9UL49 500 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 C19orf67A6NJJ6 358 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SOD3P08294 240 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 OTX1P32242 354 aaPredicted RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 CA7P43166 264 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 ZNF506Q5JVG8 444 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 CBLN3Q6UW01 205 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 WFDC8Q8IUA0 241 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 AMER3Q8N944 861 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SYT8Q8NBV8 401 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 MRPL37Q9BZE1 423 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 C5orf66Q9H5L9 145 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 WIPI2Q9Y4P8 454 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 ERVH48-1M5A8F1 160 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 ARG1P05089 322 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 RPL7P18124 248 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 RELBQ01201 579 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SLC16A13Q7RTY0 426 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 OR10AG1Q8NH19 301 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 OR4A5Q8NH83 315 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 GNRHR2Q96P88 292 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 FAM157CP0CG43 387 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 STAG3L3P0CL85 134 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SMIM10L1P0DMW3 83 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 GLI4P10075 376 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 ZNF250P15622 560 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 SPATA45Q537H7 98 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 PAPPA-AS1Q5QFB9 102 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 OR4P4Q8NGL7 312 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 ABHD3Q8WU67 409 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 TAF15Q92804 592 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD9-201ENST00000219084 SMIM10Q96HG1 83 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 LOXL4Q96JB6 756 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 LPAR5Q9H1C0 372 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 HEXA-AS1Q9H8Q6 139 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 MRPS18CQ9Y3D5 142 aaKnown RBP3.83□□□□□ -1.8
CHD9-201ENST00000219084 IGLV1-36A0A0B4J1U3 117 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 MGST3O14880 152 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 HYPMO75409 117 aa3.83□□□□□ -1.8
CHD9-201ENST00000219084 KBTBD11O94819 623 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms