RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 HTN1P15515 57 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 DCAF12L2Q5VW00 463 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 AMELYQ99218 206 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 A0A1W2PP11 408 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 APELAP0DMC3 54 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 PRF1P14222 555 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 RUNX1Q01196 453 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 WNT2BQ93097 391 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
SF3A1-201ENST00000215793 GVINP1Q7Z2Y8 2422 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 TRBV5-7A0A0A0MS05 114 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 FAM90A26D6RGX4 464 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 GREM1O60565 184 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CYB561D1Q8N8Q1 229 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CD99P14209 185 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 FOXL2P58012 376 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 BPIFA4PQ86YQ2 179 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 MS4A7Q9GZW8 240 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 SCTP09683 121 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CXCL2P19875 107 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 STPG1Q5TH74 334 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CYB5R3P00387 301 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CELA2AP08217 269 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 COX5BP10606 129 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 CLDN18P56856 261 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
SF3A1-201ENST00000215793 SLC25A45Q8N413 288 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 ADIPOR1Q96A54 375 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
SF3A1-201ENST00000215793 HSPB1P04792 205 aaKnown RBP11.71□□□□□ -0.53
SF3A1-201ENST00000215793 NMBP08949 121 aa11.71□□□□□ -0.53
SF3A1-201ENST00000215793 RGP1Q92546 391 aaPredicted RBP11.71□□□□□ -0.53
SF3A1-201ENST00000215793 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.53
SF3A1-201ENST00000215793 TMSB15BA0A087X1C1 80 aa11.71□□□□□ -0.53
SF3A1-201ENST00000215793 SAXO1Q8IYX7 474 aa11.71□□□□□ -0.53
SF3A1-201ENST00000215793 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.53
SF3A1-201ENST00000215793 MIOXQ9UGB7 285 aa11.71□□□□□ -0.53
SF3A1-201ENST00000215793 LINC00869P0C866 280 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 P2RY4P51582 365 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 OR8G5Q8NG78 346 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 FAM106CPP0CH98 169 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 SMIM10L1P0DMW3 83 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 ZNF137PP52743 207 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 LOXL3P58215 753 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 NSUN5P2Q63ZY6 315 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 SPRED2Q7Z698 418 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 PRNTQ86SH4 94 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 STPG3Q8N7X2 389 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 AQP3Q92482 292 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 SLC25A38Q96DW6 304 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 SMIM10Q96HG1 83 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 OPN3Q9H1Y3 402 aaPredicted RBP11.71□□□□□ -0.54
SF3A1-201ENST00000215793 LHFPL6Q9Y693 200 aa11.71□□□□□ -0.54
SF3A1-201ENST00000215793 IFITM10A6NMD0 228 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 FTH1P19P0C7X4 201 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-201ENST00000215793 SUCLG1P53597 346 aaKnown RBP11.7□□□□□ -0.54
SF3A1-201ENST00000215793 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 CTHRC1Q96CG8 243 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 IGHV3-21A0A0B4J1V1 117 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 ODAMA1E959 279 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 ADRA2AP08913 450 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 PKIAP61925 76 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 NPDC1Q9NQX5 325 aaPredicted RBP11.7□□□□□ -0.54
SF3A1-201ENST00000215793 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.7□□□□□ -0.54
SF3A1-201ENST00000215793 A0A1W2PS18 150 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 OVCH2Q7RTZ1 564 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 SAP25Q8TEE9 199 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
SF3A1-201ENST00000215793 SOSTQ9BQB4 213 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 ATG101Q9BSB4 218 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 PRDM14Q9GZV8 571 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 ZFP30Q9Y2G7 519 aa11.7□□□□□ -0.54
SF3A1-201ENST00000215793 NPIPB13A6NJU9 1138 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 NPIPB4C9JG80 1138 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 DLL1O00548 723 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 PGLYRP1O75594 196 aaPredicted RBP11.69□□□□□ -0.54
SF3A1-201ENST00000215793 FAM216AQ8WUB2 273 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.54
SF3A1-201ENST00000215793 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 NDUFB4O95168 129 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 TMEM30BQ3MIR4 351 aa11.69□□□□□ -0.54
SF3A1-201ENST00000215793 ZNF660Q6AZW8 331 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms