RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 F8VVB4 439 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 F8VWA3 439 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 NAT2P11245 290 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 UCP2P55851 309 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 RPP30P78346 268 aaKnown RBP10.28□□□□□ -0.76
CHPF2-201ENST00000035307 HLA-DRB3P79483 266 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 RBMXL3Q8N7X1 1067 aaKnown RBP10.28□□□□□ -0.76
CHPF2-201ENST00000035307 LHFPL5Q8TAF8 219 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 YLPM1P49750 1951 aaKnown RBP10.28□□□□□ -0.76
CHPF2-201ENST00000035307 DMXL2Q8TDJ6 3036 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 H0YL77 283 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 DNPH1O43598 174 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 TMPRSS3P57727 454 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 C1orf185Q5T7R7 199 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 VKORC1L1Q8N0U8 176 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 ZNF107Q9UII5 783 aaPredicted RBP10.28□□□□□ -0.76
CHPF2-201ENST00000035307 IGKV1-12A0A0C4DH73 117 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 MDFIC2A0A1B0GVS7 189 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 IGKV1D-12P01611 117 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 FGF12P61328 243 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 ZNF345Q14585 488 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 TMEM41BQ5BJD5 291 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 C10orf128Q5T292 105 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 LDLRAD3Q86YD5 345 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 HSF4Q9ULV5 492 aa10.28□□□□□ -0.76
CHPF2-201ENST00000035307 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 PPP5D1E7EU14 171 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 SCGB1D1O95968 90 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 NCR3LG1Q68D85 454 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 ZNF355PQ9NSJ1 428 aa10.27□□□□□ -0.76
CHPF2-201ENST00000035307 C10orf142B7Z368 130 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 C16orf97H3BN30 126 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 DEDDO75618 318 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 CNIH1O95406 144 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 F2RP25116 425 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 TNFAIP6P98066 277 aaPredicted RBP10.27□□□□□ -0.77
CHPF2-201ENST00000035307 ACSF3Q4G176 576 aaPredicted RBP10.27□□□□□ -0.77
CHPF2-201ENST00000035307 ACSM6Q6P461 480 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 ZNF665Q9H7R5 613 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 NDRG3Q9UGV2 375 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 V9GYS6 101 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 hCG_38984A0A1B0GV85 526 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 LRRC30A6NM36 301 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 COX5AP20674 150 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 SSTR5P35346 364 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 KLF3P57682 345 aaPredicted RBP10.27□□□□□ -0.77
CHPF2-201ENST00000035307 STUMQ69YW2 141 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 UQCC3Q6UW78 93 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 LRP11Q86VZ4 500 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 C1orf87Q8N0U7 546 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 CYB561D1Q8N8Q1 229 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 EDARADDQ8WWZ3 215 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 BSCL2Q96G97 398 aaPredicted RBP10.27□□□□□ -0.77
CHPF2-201ENST00000035307 COMMD5Q9GZQ3 224 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 NGBQ9NPG2 151 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 TUBG2Q9NRH3 451 aa10.27□□□□□ -0.77
CHPF2-201ENST00000035307 IGHV3-21A0A0B4J1V1 117 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 A1L4Q6 167 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 IGHV3-48P01763 117 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 CECR9P0C854 216 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 GLIPR1P48060 266 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 C22orf15Q8WYQ4 148 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 ACTR3CQ9C0K3 210 aaPredicted RBP10.26□□□□□ -0.77
CHPF2-201ENST00000035307 LPAR2Q9HBW0 351 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.26□□□□□ -0.77
CHPF2-201ENST00000035307 SLC2A8Q9NY64 477 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 WDFY3Q8IZQ1 3526 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 TRGV10A0A0A0MS01 117 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 ZNF503-AS2A6NEH8 195 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 NKX6-3A6NJ46 265 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 H0Y8G0 127 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 COX7A1P24310 79 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 MPV17P39210 176 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 KLF14Q8TD94 323 aaPredicted RBP10.26□□□□□ -0.77
CHPF2-201ENST00000035307 NTNG2Q96CW9 530 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 C10orf35Q96D05 121 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 ABHD14AQ9BUJ0 271 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 POMT1Q9Y6A1 747 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 IGKV1-27A0A075B6S5 117 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 YIF1AO95070 293 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 COL10A1Q03692 680 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 ARSJQ5FYB0 599 aaPredicted RBP10.26□□□□□ -0.77
CHPF2-201ENST00000035307 TMEM108Q6UXF1 575 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 POC1AQ8NBT0 407 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 NABP1Q96AH0 204 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 RNF126Q9BV68 326 aa10.26□□□□□ -0.77
CHPF2-201ENST00000035307 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 NPIPB13A6NJU9 1138 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 AHRRA9YTQ3 701 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 NPIPB4C9JG80 1138 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 DEFA4P12838 97 aa10.25□□□□□ -0.77
CHPF2-201ENST00000035307 CD200P41217 278 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms