RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF69Q9UC07 566 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 FAM172BPA6NC97 362 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 M0QYG6 137 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 UPK1BO75841 260 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 NFYAP23511 347 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 FAUP35544 74 aaKnown RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 RAB7AP51149 207 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 GPR157Q5UAW9 335 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF626Q68DY1 528 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF660Q6AZW8 331 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 CLEC9AQ6UXN8 241 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 SLC25A48Q6ZT89 311 aaKnown RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 ARRDC1Q8N5I2 433 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 OR4C16Q8NGL9 310 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 LEAP2Q969E1 77 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 SLC6A7Q99884 636 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 SMR3AQ99954 134 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 C7orf50Q9BRJ6 194 aaKnown RBP10.03□□□□□ -0.8
LINC00339-213ENST00000642137 HRASLSQ9HDD0 168 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
LINC00339-213ENST00000642137 IGHV1-69DA0A0B4J2H0 117 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 NAP1L6A6NFF2 107 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 CENPXA8MT69 81 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 FSHBP01225 129 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 IGHV1-69P01742 117 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 IGHV3-7P01780 117 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 ARG1P05089 322 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 COX7A1P24310 79 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 GNG10P50151 68 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-213ENST00000642137 LGALS4P56470 323 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 PRB3Q04118 309 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-213ENST00000642137 KLRD1Q13241 179 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 MIDNQ504T8 468 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-213ENST00000642137 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 OR4D10Q8NGI6 311 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 BORCS5Q969J3 196 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 CREB3L1Q96BA8 519 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-213ENST00000642137 MMP28Q9H239 520 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 TBL2Q9Y4P3 447 aaKnown RBP10.02□□□□□ -0.81
LINC00339-213ENST00000642137 CREBBPQ92793 2442 aa10.02□□□□□ -0.81
LINC00339-213ENST00000642137 TRAV40A0A0B4J280 105 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 A0A1W2PPE3 182 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 BUB1B-PAK6H3BSN5 160 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 SLC31A2O15432 143 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PLA2G10O15496 165 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 SLC22A5O76082 557 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PPYP01298 95 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 AMY2AP04746 511 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 OR8U9P0C7N5 309 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 AADACP22760 399 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 UCP3P55916 312 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 IFITM3Q01628 133 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 MINOS1Q5TGZ0 78 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PDZD9Q8IXQ8 264 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 OR8U1Q8NH10 309 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 OR56B4Q8NH76 319 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PRRT1Q99946 306 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PARP12Q9H0J9 701 aaKnown RBP10.01□□□□□ -0.81
LINC00339-213ENST00000642137 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 PIPOXQ9P0Z9 390 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 DPM3Q9P2X0 92 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 NUP50Q9UKX7 468 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 AMMECR1Q9Y4X0 333 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-213ENST00000642137 RBM7Q9Y580 266 aaKnown RBP10.01□□□□□ -0.81
LINC00339-213ENST00000642137 MINOS1-NBL1R4GNA1 71 aa10.01□□□□□ -0.81
LINC00339-213ENST00000642137 LEUTXA8MZ59 168 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 LY6LH3BQJ8 138 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 RAB29O14966 203 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 NPFFO15130 113 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 ST8SIA5O15466 376 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 HNF1AP20823 631 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 IL3RAP26951 378 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 HTR1DP28221 377 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 ECI1P42126 302 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 ZNF137PP52743 207 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 HERV-K104P61576 105 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 FAAP20Q6NZ36 180 aa10□□□□□ -0.81
LINC00339-213ENST00000642137 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms