RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 PRAMEF6Q5VXH4 476 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 C1orf174Q8IYL3 243 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 PUSL1Q8N0Z8 303 aaKnown RBP12.67□□□□□ -0.38
TRIM3-215ENST00000639856 TMEM252Q8N6L7 170 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 ZCCHC14Q8WYQ9 949 aaKnown RBP12.67□□□□□ -0.38
TRIM3-215ENST00000639856 FAM96BQ9Y3D0 163 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 RBM7Q9Y580 266 aaKnown RBP12.67□□□□□ -0.38
TRIM3-215ENST00000639856 TRGV8A0A0C4DH27 118 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 A0A0G2JRQ6 117 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 A0A1B0GU03 582 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 A6NLC8 198 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 PITX3O75364 302 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 NKX6-1P78426 367 aaPredicted RBP12.67□□□□□ -0.38
TRIM3-215ENST00000639856 KLRB1Q12918 225 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 ZNF266Q14584 549 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 WDR82Q6UXN9 313 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 UNQ6494/PRO21346Q6UXR6 183 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 ACP7Q6ZNF0 438 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 HSD17B11Q8NBQ5 300 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 UBALD1Q8TB05 177 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 SH3BGRL3Q9H299 93 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 JKAMPQ9P055 326 aa12.67□□□□□ -0.38
TRIM3-215ENST00000639856 RELNP78509 3460 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 C16orf97H3BN30 126 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 CD5P06127 495 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 OR8U9P0C7N5 309 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 ATF4P18848 351 aaPredicted RBP12.66□□□□□ -0.38
TRIM3-215ENST00000639856 CEACAM6P40199 344 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 ASCL1P50553 236 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 RAB5CP51148 216 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 C3orf36Q3SXR2 165 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 OR8U1Q8NH10 309 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 GPR146Q96CH1 333 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 PARP12Q9H0J9 701 aaKnown RBP12.66□□□□□ -0.38
TRIM3-215ENST00000639856 UFSP2Q9NUQ7 469 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 KCNIP1Q9NZI2 227 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 PPP1R3CQ9UQK1 317 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 RNF115Q9Y4L5 304 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 ROS1P08922 2347 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 COL6A6A6NMZ7 2263 aa12.66□□□□□ -0.38
TRIM3-215ENST00000639856 A0A1B0GWJ7 208 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 WRBO00258 174 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 AGPAT2O15120 278 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 CHST1O43916 411 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 TMEM50AO95807 157 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 RND1Q92730 232 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 CACFD1Q9UGQ2 172 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 KCNS2Q9ULS6 477 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 ATXN7O15265 892 aaPredicted RBP12.65□□□□□ -0.38
TRIM3-215ENST00000639856 NXPH3O95157 252 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 IGKV1-39P01597 117 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 IGKV1D-39P04432 117 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 OMGP23515 440 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 CD40P25942 277 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 CLINT1Q14677 625 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 WFDC8Q8IUA0 241 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 ODF3L1Q8IXM7 274 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
TRIM3-215ENST00000639856 LSM10Q969L4 123 aaKnown RBP12.65□□□□□ -0.38
TRIM3-215ENST00000639856 LIN7CQ9NUP9 197 aaKnown RBP12.65□□□□□ -0.38
TRIM3-215ENST00000639856 STRAPQ9Y3F4 350 aaKnown RBP12.65□□□□□ -0.38
TRIM3-215ENST00000639856 TSPAN15O95858 294 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 EPHA1P21709 976 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 CD80P33681 288 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 GLRXP35754 106 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 CAMLGP49069 296 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 DVL1P1P54792 670 aaPredicted RBP12.64□□□□□ -0.39
TRIM3-215ENST00000639856 BAXQ07812 192 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 ZNF616Q08AN1 781 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 MIDNQ504T8 468 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 GALMQ96C23 342 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 PKD1L2Q7Z442 2459 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 THBDP07204 575 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 CD200P41217 278 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 OR3A1P47881 315 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 FHITP49789 147 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 PAX9P55771 341 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 AESQ08117 197 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 ZNF585BQ52M93 769 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 COMMD1Q8N668 190 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 OR5C1Q8NGR4 320 aa12.64□□□□□ -0.39
TRIM3-215ENST00000639856 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
TRIM3-215ENST00000639856 KIAA1324LA8MWY0 1029 aaPredicted RBP12.63□□□□□ -0.39
TRIM3-215ENST00000639856 C12orf77C9JDV5 145 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 IFNL4K9M1U5 179 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 CST7O76096 145 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 SNAPINO95295 136 aa12.63□□□□□ -0.39
TRIM3-215ENST00000639856 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms