RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KHDC3LQ587J8 217 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 OR5AN1Q8NGI8 311 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 PP6455Q8WZ26 134 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 FGF20Q9NP95 211 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 DNAJC13O75165 2243 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 GFRA3O60609 400 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 TRA2AQ13595 282 aaKnown RBP eCLIP14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 DMRTA1Q5VZB9 504 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 FAHD1Q6P587 224 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 J3QR06 171 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 HIST1H1BP16401 226 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 Q8IYB0 196 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 VGLL1Q99990 258 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 AKIP1Q9NQ31 210 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 ADAMTSL1Q8N6G6 1762 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 FAM106CPP0CH98 169 aa14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 RNASE4P34096 147 aaKnown RBP14.82□□□□□ -0.04
CACNA1A-253ENST00000637927 GPBAR1Q8TDU6 330 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 IL4P05112 153 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 TDRD6O60522 2096 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 F12P00748 615 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 COTL1Q14019 142 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 DNASE2BQ8WZ79 361 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 TRAV1-2A0A0B4J238 106 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 A0A0U1RQV5 110 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 FOXI3A8MTJ6 420 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 DRD3P35462 400 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 AKAP11Q9UKA4 1901 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 TMEM170BQ5T4T1 132 aa14.81□□□□□ -0.04
CACNA1A-253ENST00000637927 MBPP02686 304 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 PCOLCEQ15113 449 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 C17orf47Q8NEP4 570 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 PPIAL4EA0A075B759 164 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 PPIAL4DF5H284 164 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ZFPL1O95159 310 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 PPIAL4FP0DN26 164 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 TMEM101Q96IK0 257 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 GSX2Q9BZM3 304 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 PPIAL4AQ9Y536 164 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 TRDCB7Z8K6 153 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ATP5G2Q06055 141 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 CYB5R2Q6BCY4 276 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 OR5AU1Q8NGC0 362 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 SPSB1Q96BD6 273 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 OR2V2Q96R30 315 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 TMEFF2Q9UIK5 374 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 TCRBV16S1A1N1A0A5B0 115 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ISG15P05161 165 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 FTH1P19P0C7X4 201 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ZDHHC22Q8N966 263 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 CTAG2O75638 210 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 CDK2AP2O75956 126 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ANOS1P23352 680 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 LINC01587Q99440 93 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 MMP26Q9NRE1 261 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ALS2Q96Q42 1657 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 SPSB4Q96A44 273 aa14.8□□□□□ -0.04
CACNA1A-253ENST00000637927 ZNFX1Q9P2E3 1918 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TJP1Q07157 1748 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 A0A087X0M5 115 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 A0A1B0GX30 115 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 CEACAM18A8MTB9 384 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 PLP1P60201 277 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TGIF1Q15583 401 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 LAMTOR1Q6IAA8 161 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 C1orf162Q8NEQ5 155 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 PIPOXQ9P0Z9 390 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 SCN1AP35498 2009 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 RBFOX2O43251 390 aaKnown RBP eCLIP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 COX6CP09669 75 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 STAG3L2P0CL84 134 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TMPRSS3P57727 454 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 OR2C3Q8N628 320 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 MED30Q96HR3 178 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 ZFP36L2P47974 494 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 EIF3IQ13347 325 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 SRSF7Q16629 238 aaKnown RBP eCLIP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 Q71RC1 249 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 C10orf126Q8N4M7 172 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 KIAA1217Q5T5P2 1943 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TRIP12Q14669 1992 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 RBFOX3A6NFN3 312 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 IL11P20809 199 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 RND2P52198 227 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TMEM56-RWDD3S4R434 201 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 CDC42EP2O14613 210 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 PSCAO43653 123 aa14.79□□□□□ -0.04
CACNA1A-253ENST00000637927 TRGV2A0A075B6R0 118 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 CTSDP07339 412 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 SRD5A2P31213 254 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 ASCL5Q7RTU5 278 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 SLC25A33Q9BSK2 321 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 MCM3APO60318 1980 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 SFT2D2O95562 160 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 IGHV3-11P01762 117 aa14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 NUDT16L1Q9BRJ7 211 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-253ENST00000637927 RCC2Q9P258 522 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms