RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 TMEM171Q8WVE6 324 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 TM2D1Q9BX74 207 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 STRADBQ9C0K7 418 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 VN1R1Q9GZP7 353 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 C1RLQ9NZP8 487 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 POLR1DQ9Y2S0 133 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 R4GMQ9 66 aa6.77□□□□□ -1.33
CDKL5-211ENST00000637881 ABCA7Q8IZY2 2146 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 LOC107986453A0A1B0GWG9 222 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 H0Y8X5 98 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 K7EP34 96 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 STAG3L2P0CL84 134 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF728P0DKX0 622 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 CD33P20138 364 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 SRD5A2P31213 254 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 MDH2P40926 338 aaKnown RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 NKX2-1P43699 371 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 GPR1P46091 355 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 DUSP3P51452 185 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 CCL7P80098 99 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 HSD52Q0P140 79 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 ARFRP1Q13795 201 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 ODF1Q14990 250 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 HLA-DRB5Q30154 266 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 LINC00346Q8IVM7 164 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 LRRC75AQ8NAA5 344 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 OR52M1Q8NGK5 317 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 NUS1Q96E22 293 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 NEIL1Q96FI4 390 aaPredicted RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 KCNK17Q96T54 332 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 MRPL18Q9H0U6 180 aaKnown RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
CDKL5-211ENST00000637881 OR1A2Q9Y585 309 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 DNAH14Q0VDD8 3507 aa6.76□□□□□ -1.33
CDKL5-211ENST00000637881 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 PIGBOS1A0A0B4J2F0 54 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 A0A0G2JMM0 328 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 CENPVL1A0A0U1RR11 272 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 A0A1W2PPB8 328 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 GRIFINA4D1Z8 144 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 PSMB11A5LHX3 300 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 KIR3DP1A8MWS1 328 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 NPIPA5E9PKD4 350 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 NPIPA3F8WFD2 350 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 J3QR89 54 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 DEGS1O15121 323 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF324O75467 553 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 RHBDL1O75783 438 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 TNFP01375 233 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 IGHV4-34P06331 123 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 FTH1P19P0C7X4 201 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 AMTP48728 403 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 MRPS34P82930 218 aaKnown RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 RTP5Q14D33 572 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 ZIC1Q15915 447 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 MEP1BQ16820 701 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF793Q6ZN11 406 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 RD3Q7Z3Z2 195 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 OR10V1Q8NGI7 309 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 MRPL30Q8TCC3 161 aaKnown RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 DOK4Q8TEW6 326 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 BORCS7Q96B45 105 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 MSI2Q96DH6 328 aaKnown RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 KLHDC7BQ96G42 594 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 LIN37Q96GY3 246 aaPredicted RBP6.75□□□□□ -1.33
CDKL5-211ENST00000637881 PMCHL2Q9BQD1 86 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 SPXQ9BT56 116 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 RPRMQ9NS64 109 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 NPIPA1Q9UND3 350 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 RNF114Q9Y508 228 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 TIMM9Q9Y5J7 89 aa6.75□□□□□ -1.33
CDKL5-211ENST00000637881 TRAV8-6A0A0B4J262 113 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 SH2D1BO14796 132 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 RBMXL2O75526 392 aaKnown RBP6.74□□□□□ -1.33
CDKL5-211ENST00000637881 RAD51DO75771 328 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 IGLV3-19P01714 112 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 HIST1H1TP22492 207 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-211ENST00000637881 HNRNPA2B1P22626 353 aaKnown RBP6.74□□□□□ -1.33
CDKL5-211ENST00000637881 OPRM1P35372 400 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 RRADP55042 308 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 PIGPP57054 158 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 PLP1P60201 277 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 RUNX1Q01196 453 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 HIST1H1AQ02539 215 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-211ENST00000637881 ZP4Q12836 540 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF726P1Q15940 193 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 ABCA11PQ4W5N1 156 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 ZNF542PQ5EBM4 170 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 LYSMD4Q5XG99 296 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 CCDC144NLQ6NUI1 221 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 LYZL2Q7Z4W2 148 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 OR4N5Q8IXE1 308 aa6.74□□□□□ -1.33
CDKL5-211ENST00000637881 PLPPR1Q8TBJ4 325 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms