RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 PGAM1P18669 254 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 MSNP26038 577 aaKnown RBP3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 HCCSP53701 268 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 RPL23P62829 140 aaKnown RBP3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 BTG2P78543 158 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 NAB1Q13506 487 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 GUSBP1Q15486 140 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 C18orf21Q32NC0 220 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 CCSMST1Q4G0I0 132 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 UGT2A3Q6UWM9 527 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 SSX8Q7RTT4 187 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF550Q7Z398 422 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 SH2D6Q7Z4S9 175 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 LRRC6Q86X45 466 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 PGAM4Q8N0Y7 254 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF567Q8N184 647 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 TCAIMQ8N3R3 496 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF433Q8N7K0 673 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR5W2Q8NH69 310 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR1S1Q8NH92 325 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 C15orf40Q8WUR7 153 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 TMEM234Q8WY98 164 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 LRRC45Q96CN5 670 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 NDFIP1Q9BT67 221 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 DOHHQ9BU89 302 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 PCBD2Q9H0N5 130 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 WDR55Q9H6Y2 383 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 MED29Q9NX70 200 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 VAPAQ9P0L0 249 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNRD1Q9P1U0 126 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 TAC3Q9UHF0 121 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 WIF1Q9Y5W5 379 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 TMEM14AQ9Y6G1 99 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 PLCE1Q9P212 2302 aa3.27□□□□□ -1.89
TRAPPC9-216ENST00000634178 EXPH5Q8NEV8 1989 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 GOLGA8MH3BSY2 632 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 PSMD12O00232 456 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 TNFRSF11BO00300 401 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR1I1O60431 355 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 REM1O75628 298 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 PROSCO94903 275 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 CCL2P13500 99 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 PRKACBP22694 351 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 RPS3P23396 243 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 CACNG7P62955 275 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 SLC35A1P78382 337 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR1Q1Q15612 314 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 BCL2A1Q16548 175 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 SMUG1Q53HV7 270 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 NCMAPQ5T1S8 102 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 CDKL3Q8IVW4 592 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 OTUD6BQ8N6M0 293 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR51A7Q8NH64 312 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 NT5CQ8TCD5 201 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZFAND1Q8TCF1 268 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF418Q8TF45 676 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 SRSF12Q8WXF0 261 aaKnown RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 ANKRD7Q92527 254 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 CDKL2Q92772 493 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 CCDC124Q96CT7 223 aaKnown RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 PRAP1Q96NZ9 151 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 HINT2Q9BX68 163 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF257Q9Y2Q1 563 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 C15orf41Q9Y2V0 281 aa3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 NUP214P35658 2090 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC9-216ENST00000634178 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 GOLGA8QA0A0J9YX86 632 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF860A6NHJ4 632 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 LINC01619G3V211 115 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 GOLGA8RI6L899 631 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 CCL22O00626 93 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 IGKV3-11P04433 115 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 OR5AL1P0C617 328 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF688P0C7X2 276 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 ZNF708P17019 499 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 APLNRP35414 380 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 GGT2P36268 569 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 SRP14P37108 136 aaKnown RBP3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 GPR4P46093 362 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 TTPAP49638 278 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 PPOXP50336 477 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 UBE2E1P51965 193 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 EFNA4P52798 201 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 DSTNP60981 165 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 ESRRGP62508 458 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 RPL31P62899 125 aaKnown RBP3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 CRADDP78560 199 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 BIKQ13323 160 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 DEFB134Q4QY38 66 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 MDP1Q86V88 176 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 SAXO1Q8IYX7 474 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 SYCE1Q8N0S2 351 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 CA13Q8N1Q1 262 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 TEX29Q8N6K0 151 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 LGALS14Q8TCE9 139 aa3.25□□□□□ -1.89
TRAPPC9-216ENST00000634178 RXFP4Q8TDU9 374 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms