RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	OR2G3	Q8NGZ4	309 aa		11.28	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR2A7	Q96R45	310 aa		11.28	□□□□□ -0.6
NRXN1-233	ENST00000630543	S1PR3	Q99500	378 aa		11.28	□□□□□ -0.6
NRXN1-233	ENST00000630543	SLC25A32	Q9H2D1	315 aa		11.28	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A10P	A6NDY2	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A18P	A6NE21	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A16P	A6NEW6	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A20P	A6NIJ5	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A8P	A6NJQ4	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A7P	A6NKC0	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A22P	A8MWA6	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A12P	A8MX19	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A5P	A8MXJ8	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A23P	A8MXZ1	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	IQCF6	A8MYZ5	107 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	PROB1	E7EW31	1015 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A15P	P0C7V4	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A13P	P0C7W8	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A14P	P0C7W9	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM90A24P	P0C7X0	464 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	RAB5C	P51148	216 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	ELL	P55199	621 aa	Predicted RBP	11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	TMEM33	P57088	247 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	PLPPR1	Q8TBJ4	325 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	PLEKHA2	Q9HB19	425 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	IL36G	Q9NZH8	169 aa		11.27	□□□□□ -0.6
NRXN1-233	ENST00000630543	CRYM-AS1	A6NIL9	109 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	MGST1	P10620	155 aa	Known RBP	11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	GLRX	P35754	106 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	HFE	Q30201	348 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	SLC16A13	Q7RTY0	426 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	WDR31	Q8NA23	367 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	OR1S2	Q8NGQ3	325 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	FRYL	O94915	3013 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	TRAV24	A0A0B4J272	114 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	ID4	P47928	161 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	ADIRF	Q15847	76 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	ERGIC1	Q969X5	290 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	TP53RK	Q96S44	253 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	C19orf12	Q9NSK7	152 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	PSENEN	Q9NZ42	101 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	TNFSF18	Q9UNG2	199 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	JTB	O76095	146 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	TMEM230	Q96A57	120 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	RAB39B	Q96DA2	213 aa		11.27	□□□□□ -0.61
NRXN1-233	ENST00000630543	OPN1MW	P04001	364 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	OPN1MW2	P0DN77	364 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	OPN1MW3	P0DN78	364 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	HTD2	P86397	168 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	AANAT	Q16613	207 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	HAGH	Q16775	308 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	COLCA1	Q6ZS62	124 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	SIGLEC5	O15389	551 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	CA11	O75493	328 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	BAX	Q07812	192 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	ZNF266	Q14584	549 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	LRRC10	Q5BKY1	277 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543		Q6ZRG5	221 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	SFT2D1	Q8WV19	159 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	PIGM	Q9H3S5	423 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543		J3QW42	95 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	CLDN14	O95500	239 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	HBG1	P69891	147 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	HBG2	P69892	147 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	KLRB1	Q12918	225 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	MRPL37	Q9BZE1	423 aa	Known RBP	11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	PRO1933	Q9H354	126 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	RPH3AL	Q9UNE2	315 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	MYO15A	Q9UKN7	3530 aa		11.26	□□□□□ -0.61
NRXN1-233	ENST00000630543	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	MBD3L3	A6NE82	208 aa	Predicted RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	PPIH	O43447	177 aa	Known RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CHST1	O43916	411 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	METTL15P1	P0C7V9	234 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	G6PC	P35575	357 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	TMEM41B	Q5BJD5	291 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CLLU1	Q5K131	121 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	OR52M1	Q8NGK5	317 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	MEGF10	Q96KG7	1140 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	SMCO4	Q9NRQ5	59 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CISD1	Q9NZ45	108 aa	Known RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543		A0A0G2JNJ9	132 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	TNFSF13	O75888	250 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	PTBP3	O95758	552 aa	Known RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	VDAC1	P21796	283 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	KCNJ3	P48549	501 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	LY6G6F	Q5SQ64	297 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	ACP7	Q6ZNF0	438 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	RBMXL1	Q96E39	390 aa	Known RBP	11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543		Q9UFV3	132 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	IGKV1D-13	A0A0B4J2D9	117 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CLEC18A	A5D8T8	446 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CBY3	A6NI87	242 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	IGKV1-13	P0DP09	117 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	F2R	P25116	425 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	RAB11A	P62491	216 aa		11.25	□□□□□ -0.61
NRXN1-233	ENST00000630543	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms