RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 GAB2Q9UQC2 676 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 NUBP2Q9Y5Y2 271 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 PEX16Q9Y5Y5 336 aa8.49□□□□□ -1.05
DDX41-218ENST00000625286 A0A1W2PPK0 400 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 SNTNA6NMZ2 147 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 MCRIP1C9JLW8 97 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 LINC01619G3V211 115 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 IGHV3-11P01762 117 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 IGHV4-30-4P0DP06 118 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 CRIP2P52943 208 aaPredicted RBP8.48□□□□□ -1.05
DDX41-218ENST00000625286 CX3CL1P78423 397 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 RIPK1Q13546 671 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 SRSF7Q16629 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
DDX41-218ENST00000625286 ECSCRQ19T08 205 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 LRRC36Q1X8D7 754 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 STX19Q8N4C7 294 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 ZNF485Q8NCK3 441 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 MRPL30Q8TCC3 161 aaKnown RBP8.48□□□□□ -1.05
DDX41-218ENST00000625286 GHSRQ92847 366 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 ABHD14AQ9BUJ0 271 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
DDX41-218ENST00000625286 FBXL15Q9H469 300 aa8.48□□□□□ -1.05
DDX41-218ENST00000625286 SAA2-SAA4A0A096LPE2 208 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 TRBV5-7A0A0A0MS05 114 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 LOC100130705A0A1B0GUX0 176 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 A0A1W2PN81 502 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 ZNF780AO75290 641 aaPredicted RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 CD2P06729 351 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 LGALS1P09382 135 aaKnown RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 SAA2P0DJI9 122 aaPredicted RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 CT45A6P0DMU7 189 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 CT45A5P0DMU8 189 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 CT45A7P0DMV0 189 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 CHRNA7P36544 502 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 PPP3R1P63098 170 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 C6orf141Q5SZD1 244 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 C6orf183Q5T699 404 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 DMKNQ6E0U4 476 aaPredicted RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 IL34Q6ZMJ4 242 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 ZFP41Q8N8Y5 198 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 SMIM19Q96E16 107 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 RHOVQ96L33 236 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 PGLYRP3Q96LB9 341 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 Q96M66 194 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 S100A13Q99584 98 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 FAM103A1Q9BTL3 118 aaKnown RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 KRTAP17-1Q9BYP8 105 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 SELENOIQ9C0D9 397 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 IFI27L2Q9H2X8 130 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 ZMAT4Q9H898 229 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 PAK1IP1Q9NWT1 392 aaPredicted RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 BABAM2Q9NXR7 383 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 MRPS28Q9Y2Q9 187 aaKnown RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 RPL36Q9Y3U8 105 aaKnown RBP8.47□□□□□ -1.05
DDX41-218ENST00000625286 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
DDX41-218ENST00000625286 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.05
DDX41-218ENST00000625286 A8MZ25 164 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 YPEL1O60688 119 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 PROP1O75360 226 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 BAG2O95816 211 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 MGMTP16455 207 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 FUT3P21217 361 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 LINC00205P59089 165 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 HTD2P86397 168 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 TMEM30BQ3MIR4 351 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 RPL39P5Q59GN2 51 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 LY6G6FQ5SQ64 297 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 GLDNQ6ZMI3 551 aaPredicted RBP8.46□□□□□ -1.06
DDX41-218ENST00000625286 Q96MT0 163 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 MS4A10Q96PG2 267 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 YPEL2Q96QA6 119 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 OR14A2Q96R54 314 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
DDX41-218ENST00000625286 SPACA1Q9HBV2 294 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 PALMDQ9NP74 551 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 KIAA1456Q9P272 454 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 FOXA2Q9Y261 457 aaPredicted RBP8.46□□□□□ -1.06
DDX41-218ENST00000625286 A3GALT2U3KPV4 340 aa8.46□□□□□ -1.06
DDX41-218ENST00000625286 RRHO14718 337 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 LDLRAD4O15165 306 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 IGLV1-51P01701 117 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 MAS1P04201 325 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
DDX41-218ENST00000625286 OR8U9P0C7N5 309 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 FSTP19883 344 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 GPR176Q14439 515 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 ZNF660Q6AZW8 331 aaPredicted RBP8.45□□□□□ -1.06
DDX41-218ENST00000625286 CD200R1LQ6Q8B3 271 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 FAM131AQ6UXB0 335 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 JAGN1Q8N5M9 183 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 OR6Q1Q8NGQ2 317 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 MRPS24Q96EL2 167 aaKnown RBP8.45□□□□□ -1.06
DDX41-218ENST00000625286 SULT4A1Q9BR01 284 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 THAP7Q9BT49 309 aaPredicted RBP8.45□□□□□ -1.06
DDX41-218ENST00000625286 JPT1Q9UK76 154 aa8.45□□□□□ -1.06
DDX41-218ENST00000625286 FAM90A7PA6NKC0 464 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms