RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 NUFIP2Q7Z417 695 aaKnown RBP12.89□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 TMEM68Q96MH6 324 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 DEGS1O15121 323 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 BCL2P10415 239 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 PLP2Q04941 152 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 Q6P435 159 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 UFSP2Q9NUQ7 469 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 PSENENQ9NZ42 101 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 MPC1Q9Y5U8 109 aa12.89□□□□□ -0.35
LINC00552-201ENST00000625151 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 TRGC2P03986 189 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 MYPOPQ86VE0 399 aaPredicted RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 TTTY12Q9BZ98 90 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 OR51I2Q9H344 312 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 CISD1Q9NZ45 108 aaKnown RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 A0A1W2PR80 420 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF729A6NN14 1252 aaPredicted RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 WNT2P09544 360 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF16P17020 682 aaPredicted RBP12.88□□□□□ -0.35
LINC00552-201ENST00000625151 NUBP1P53384 320 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 OTOGLQ3ZCN5 2332 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF585BQ52M93 769 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 OR1K1Q8NGR3 316 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 PLA2G3Q9NZ20 509 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 OR14J1Q9UGF5 321 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 PRSS50Q9UI38 385 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
LINC00552-201ENST00000625151 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 SIRPB1O00241 398 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 APLNRP35414 380 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
LINC00552-201ENST00000625151 ACP1P24666 158 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 PKIBQ9C010 78 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
LINC00552-201ENST00000625151 OR1C1Q15619 314 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 ABHD17BQ5VST6 288 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 CA5BP1Q8WTZ4 195 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 PSMG3Q9BT73 122 aaPredicted RBP12.86□□□□□ -0.35
LINC00552-201ENST00000625151 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
LINC00552-201ENST00000625151 RBM7Q9Y580 266 aaKnown RBP12.86□□□□□ -0.35
LINC00552-201ENST00000625151 B4DEV8 164 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 J3QT63 122 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 WDR1O75083 606 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 MT-CO3P00414 261 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 PLA2G5P39877 138 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 TCF15Q12870 199 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 VASH2Q86V25 355 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 PARD6AQ9NPB6 346 aa12.86□□□□□ -0.35
LINC00552-201ENST00000625151 PIGBOS1A0A0B4J2F0 54 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 OR2H2O95918 312 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 IL18BPO95998 194 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 S100A2P29034 98 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
LINC00552-201ENST00000625151 CLN3Q13286 438 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 LINC00696Q6ZRV3 163 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 SSX3Q99909 188 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 SOD3P08294 240 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 ELLP55199 621 aaPredicted RBP12.85□□□□□ -0.35
LINC00552-201ENST00000625151 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 SPANXN5Q5MJ07 72 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 ALKBH2Q6NS38 261 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 FAM210BQ96KR6 192 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 WDR61Q9GZS3 305 aaKnown RBP12.85□□□□□ -0.35
LINC00552-201ENST00000625151 DOCK11Q5JSL3 2073 aa12.85□□□□□ -0.35
LINC00552-201ENST00000625151 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 HBG1P69891 147 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 HBG2P69892 147 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 PNRC1Q12796 327 aaPredicted RBP12.84□□□□□ -0.35
LINC00552-201ENST00000625151 OR2B11Q5JQS5 317 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 MDP1Q86V88 176 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 PRSS33Q8NF86 280 aa12.84□□□□□ -0.35
LINC00552-201ENST00000625151 ABHD5Q8WTS1 349 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms