RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 MT-ND4LP03901 98 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 FGF12P61328 243 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 CTAG1AP78358 180 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 ZNF266Q14584 549 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 MKXQ8IYA7 352 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 ZFP82Q8N141 532 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 HSD17B11Q8NBQ5 300 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 CLEC18CQ8NCF0 446 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 EIF5A2Q9GZV4 153 aaKnown RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 KALRNO60229 2985 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 C1orf196B1AJZ1 125 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 H0YL77 283 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 BCL3P20749 454 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 AGAP20933 346 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 GRNP28799 593 aaKnown RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 NKX2-1P43699 371 aaPredicted RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 MEOX2P50222 304 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 KLF3P57682 345 aaPredicted RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 SELENOVP59797 346 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 RHEBQ15382 184 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 Q6ZR03 302 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 BBC3Q96PG8 261 aaPredicted RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 PKIBQ9C010 78 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 SLC35B3Q9H1N7 401 aa12.74□□□□□ -0.37
ATRX-211ENST00000623321 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
ATRX-211ENST00000623321 A0A1B0GWJ7 208 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 IGSF23A1L1A6 192 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 LRP5LA4QPB2 252 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 TMEM210A6NLX4 147 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 MLNRO43193 412 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 TUSC2O75896 110 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 C1QL1O75973 258 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 TK1P04183 234 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 MMP9P14780 707 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 ZNF44P15621 663 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 S100A12P80511 92 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 TFF3Q07654 80 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 IL24Q13007 206 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 TMEM182Q6ZP80 229 aaPredicted RBP12.73□□□□□ -0.37
ATRX-211ENST00000623321 ZNF695Q8IW36 515 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 ZNF808Q8N4W9 903 aaPredicted RBP12.73□□□□□ -0.37
ATRX-211ENST00000623321 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 PLEKHF2Q9H8W4 249 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 LYRM2Q9NU23 88 aaPredicted RBP12.73□□□□□ -0.37
ATRX-211ENST00000623321 IGSF10Q6WRI0 2623 aa12.73□□□□□ -0.37
ATRX-211ENST00000623321 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
ATRX-211ENST00000623321 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 WDR86Q86TI4 376 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 ZNF565Q8N9K5 539 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 FAM213BQ8TBF2 198 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 MSL2Q9HCI7 577 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 MTCH1Q9NZJ7 389 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 ATP23Q9Y6H3 246 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 FAM24AA6NFZ4 105 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 J3QT63 122 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 SYNGR1O43759 233 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 ZG16O60844 167 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 CLDN14O95500 239 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 CTXN2P0C2S0 81 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 UCP1P25874 307 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
ATRX-211ENST00000623321 AKR1C3P42330 323 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 KIR2DS4P43632 304 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 NMSQ5H8A3 153 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 ZNF818PQ6ZRF7 136 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
ATRX-211ENST00000623321 IL22RA2Q969J5 263 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 PLPPR2Q96GM1 343 aa12.72□□□□□ -0.37
ATRX-211ENST00000623321 MRPL37Q9BZE1 423 aaKnown RBP12.72□□□□□ -0.37
ATRX-211ENST00000623321 BTBD17A6NE02 478 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 M0R036 132 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 POLR2GP62487 172 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATRX-211ENST00000623321 ZNF154Q13106 437 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 CLINT1Q14677 625 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 HERPUD1Q15011 391 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 LINC00596Q86U02 117 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 GAPTQ8N292 157 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 ZNF561Q8N587 486 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
ATRX-211ENST00000623321 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
ATRX-211ENST00000623321 GTF3AQ92664 365 aaKnown RBP12.71□□□□□ -0.37
ATRX-211ENST00000623321 CADP27708 2225 aa12.7□□□□□ -0.38
ATRX-211ENST00000623321 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
ATRX-211ENST00000623321 C5orf52A6NGY3 159 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms