RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RNF223E7ERA6 249 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 RGS13O14921 159 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 TUSC2O75896 110 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 PPYP01298 95 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 TMEM30BQ3MIR4 351 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 AADACL3Q5VUY0 350 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 OR10A7Q8NGE5 316 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 TOMM40LQ969M1 308 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 MRGPRFQ96AM1 343 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 FOXC2Q99958 501 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 SLC25A21Q9BQT8 299 aaPredicted RBP14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 PARP12Q9H0J9 701 aaKnown RBP14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 GFOD1Q9NXC2 390 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 OR2W1Q9Y3N9 320 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 C17orf98A8MV24 154 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 METTL11BQ5VVY1 283 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 OR52M1Q8NGK5 317 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 MARCH1Q8TCQ1 289 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 MOB3AQ96BX8 217 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 REG4Q9BYZ8 158 aa14.63□□□□□ -0.07
PTCHD3-202ENST00000622555 CR1P17927 2039 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 IGHV2-70DA0A0C4DH43 119 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 hCG_1809904A0A1W2PP81 198 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 A0A1W2PPE2 198 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 A0A1W2PR64 198 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 A0A1W2PRV1 198 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 ARPC1BO15143 372 aaKnown RBP14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 RGS11O94810 467 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 IGHV3-7P01780 117 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 PGAM2P15259 253 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 ARF6P62330 175 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 LOXL1Q08397 574 aaPredicted RBP14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 MORN2Q502X0 79 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 GLDNQ6ZMI3 551 aaPredicted RBP14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 C11orf42Q8N5U0 333 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 LEAP2Q969E1 77 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 FXYD6Q9H0Q3 95 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 MMP26Q9NRE1 261 aa14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 ASH1LQ9NR48 2969 aaKnown RBP14.62□□□□□ -0.07
PTCHD3-202ENST00000622555 YPEL1O60688 119 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 RBP4P02753 201 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 IGHV1-8P0DP01 117 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 PAX2Q02962 417 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 BAMBIQ13145 260 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 ZFAND1Q8TCF1 268 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 CAPSLQ8WWF8 208 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 DACT3Q96B18 629 aaPredicted RBP14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 YPEL2Q96QA6 119 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 SUCNR1Q9BXA5 334 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 TOLLIPQ9H0E2 274 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 POLR3KQ9Y2Y1 108 aaPredicted RBP14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 RBM7Q9Y580 266 aaKnown RBP14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 IGKV1D-13A0A0B4J2D9 117 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 SNRPGP15A8MWD9 76 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 RLN1P04808 185 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 IGKV1-13P0DP09 117 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 ECI1P42126 302 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 LUMP51884 338 aaPredicted RBP14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 UTF1Q5T230 341 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 BTNL3Q6UXE8 466 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 WFDC11Q8NEX6 87 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 SECTM1Q8WVN6 248 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 VSIG4Q9Y279 399 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 SESN1Q9Y6P5 492 aa14.61□□□□□ -0.07
PTCHD3-202ENST00000622555 M0R1W7 72 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 OR8U9P0C7N5 309 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 CXCL3P19876 107 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 KIR3DL3Q8N743 410 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 ZDHHC22Q8N966 263 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 MAPK1IP1LQ8NDC0 245 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 OR2AK2Q8NG84 335 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 OR8U1Q8NH10 309 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 EDARADDQ8WWZ3 215 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 SCGB3A2Q96PL1 93 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 SLC5A7Q9GZV3 580 aa14.6□□□□□ -0.07
PTCHD3-202ENST00000622555 B4DSR2 109 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 ANXA3P12429 323 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 GNG10P50151 68 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 SURF2Q15527 256 aaPredicted RBP14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 TMED4Q7Z7H5 227 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 Q8N7P7 452 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 ALX4Q9H161 411 aaPredicted RBP14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 PSG11Q9UQ72 335 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 BAHCC1Q9P281 2608 aa14.59□□□□□ -0.07
PTCHD3-202ENST00000622555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 A0A1W2PPE3 182 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 ST8SIA5O15466 376 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 ATP6V1G1O75348 118 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 MSMBP08118 114 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 VSIG10L2P0DP72 767 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 PI3P19957 117 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 DVL1P1P54792 670 aaPredicted RBP14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 UCP3P55916 312 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 DLX1P56177 255 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 ZNF626Q68DY1 528 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 LDLRAD3Q86YD5 345 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 SLC38A6Q8IZM9 456 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 TMEM133Q9H2Q1 129 aa14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 METTL8Q9H825 291 aaKnown RBP14.58□□□□□ -0.07
PTCHD3-202ENST00000622555 BEX1Q9HBH7 125 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms