RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 MRPL30Q8TCC3 161 aaKnown RBP10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 KIAA1456Q9P272 454 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 KLF2Q9Y5W3 355 aaPredicted RBP10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 SIGLEC5O15389 551 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 QRFPP83859 136 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 VAX1Q5SQQ9 334 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 DCAF12L2Q5VW00 463 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 ABHD12Q8N2K0 398 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF729A6NN14 1252 aaPredicted RBP10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 ARG1P05089 322 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 STUMQ69YW2 141 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 GLDNQ6ZMI3 551 aaPredicted RBP10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 OVCH2Q7RTZ1 564 aa10.45□□□□□ -0.74
SCAMP1-207ENST00000621999 COL27A1Q8IZC6 1860 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 A0A1B0GW55 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 FAM157AC9JC47 383 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 CTSDP07339 412 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L2P0CJ85 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L3P0CJ86 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L4P0CJ87 422 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L5P0CJ88 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L6P0CJ89 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L7P0CJ90 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 CLEC12BQ2HXU8 276 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 PNKDQ8N490 385 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 MARVELD1Q9BSK0 173 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 SMIM3Q9BZL3 60 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 MAGT1Q9H0U3 335 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 NAA60Q9H7X0 242 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 SLC35D1Q9NTN3 355 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 ZFP57Q9NU63 452 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4Q9UBX2 424 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 IFNA10P01566 189 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 GPR157Q5UAW9 335 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DUSP18Q8NEJ0 188 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 FGF23Q9GZV9 251 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 VSIG4Q9Y279 399 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 AMMECR1Q9Y4X0 333 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 DMDP11532 3685 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 PRH1P02810 166 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 IFNA4P05014 189 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 HOXA1P49639 335 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 RAP2BP61225 183 aa10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
SCAMP1-207ENST00000621999 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 FYTTD1Q96QD9 318 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 PIPOXQ9P0Z9 390 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 RPL23AP62750 156 aaKnown RBP10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF546Q86UE3 836 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 ADAP1O75689 374 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 F12P00748 615 aaPredicted RBP10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 OPN1MWP04001 364 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 OPN1MW2P0DN77 364 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 OPN1MW3P0DN78 364 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 NKX2-1P43699 371 aaPredicted RBP10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 SWI5Q1ZZU3 235 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 FAM76BQ5HYJ3 339 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 CLEC18BQ6UXF7 455 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 LILRB2Q8N423 598 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF596Q8TC21 504 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 LURAP1Q96LR2 239 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 COMMD5Q9GZQ3 224 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 BOD1L1Q8NFC6 3051 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 RAB29O14966 203 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 GPR37O15354 613 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 DHODHQ02127 395 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF497Q6ZNH5 498 aa10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 ZNF436Q9C0F3 470 aaPredicted RBP10.43□□□□□ -0.74
SCAMP1-207ENST00000621999 KBTBD11-OT1A0A1B0GTJ5 212 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SNRPGP15A8MWD9 76 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SFT2D2O95562 160 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SURF2Q15527 256 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SSX2Q16385 188 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SHEQ5VZ18 495 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 Q6P435 159 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 ASCL4Q6XD76 172 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 C19orf12Q9NSK7 152 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 OR2F2O95006 317 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 NHLRC3Q5JS37 347 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 SLC35G3Q8N808 338 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 TRAF4Q9BUZ4 470 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 GATA4P43694 442 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 HYLS1Q96M11 299 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 MS4A7Q9GZW8 240 aaPredicted RBP10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 C7orf69Q9H7B7 122 aa10.42□□□□□ -0.74
SCAMP1-207ENST00000621999 LHX4Q969G2 390 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 LINC00312Q9Y6C7 94 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 HRASP01112 189 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 IL5P05113 134 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 WDR25Q64LD2 544 aaPredicted RBP10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 HIST2H2BCQ6DN03 193 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 STX12Q86Y82 276 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 TMEM217Q8N7C4 229 aa10.41□□□□□ -0.74
SCAMP1-207ENST00000621999 SCGB1C1Q8TD33 95 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms