RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DUX4L5P0CJ88 424 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DUX4L6P0CJ89 424 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DUX4L7P0CJ90 424 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 ASCL1P50553 236 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 TMEM33P57088 247 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 POLR2GP62487 172 aaKnown RBP eCLIP14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 LTC4SQ16873 150 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DUX4L9Q6RFH8 374 aaPredicted RBP14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZNF645Q8N7E2 425 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DEFB108BQ8NET1 73 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 FAM222BQ8WU58 562 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 TMED6Q8WW62 240 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 ERGIC1Q969X5 290 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 SDHAF2Q9NX18 166 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DUX4Q9UBX2 424 aa14.46□□□□□ -0.1
PCDHGC3-205ENST00000617641 DSCAMO60469 2012 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 POLEQ07864 2286 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 CLEC18AA5D8T8 446 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 DEFB108AA8MXU0 73 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 SPINT2O43291 252 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 NXPH3O95157 252 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 EPHA1P21709 976 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 EDDM3BP56851 147 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZNF808Q8N4W9 903 aaPredicted RBP14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 CLEC18CQ8NCF0 446 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 TOLLIPQ9H0E2 274 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 MAGT1Q9H0U3 335 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 MED9Q9NWA0 146 aa14.45□□□□□ -0.1
PCDHGC3-205ENST00000617641 C17orf100A8MU93 164 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 TAAR5O14804 337 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZNF585BQ52M93 769 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 TRAT1Q6PIZ9 186 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 KDF1Q8NAX2 398 aaPredicted RBP14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 Q8TCH9 128 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 NEUROG1Q92886 237 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 NGBQ9NPG2 151 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 LIN7CQ9NUP9 197 aaKnown RBP14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 PFDN2Q9UHV9 154 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 DYSFO75923 2080 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 ATRXP46100 2492 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 RAI1Q7Z5J4 1906 aaPredicted RBP14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 MFSD2BA6NFX1 497 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 SHISA9B4DS77 424 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 P2RY1P47900 373 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 P2RX3P56373 397 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 IZUMO4Q1ZYL8 232 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 STUMQ69YW2 141 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 GPR146Q96CH1 333 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 PLPPR2Q96GM1 343 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 C11orf1Q9H5F2 150 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 PLEKHF2Q9H8W4 249 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 NCOR2Q9Y618 2525 aa14.44□□□□□ -0.1
PCDHGC3-205ENST00000617641 SSSCA1O60232 199 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 GPR137BO60478 399 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 NCMAPQ5T1S8 102 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 DMRTC2Q8IXT2 367 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 RNASE11Q8TAA1 199 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 CHD8Q9HCK8 2581 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 ROS1P08922 2347 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 GRNP28799 593 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 TLE1Q04724 770 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZNF561Q8N587 486 aa14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZCCHC14Q8WYQ9 949 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-205ENST00000617641 GYPAP02724 150 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 ADH4P08319 380 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 IRF2P14316 349 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 GZMHP20718 246 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 RPL30P62888 115 aaKnown RBP14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 HTD2P86397 168 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 BTNL3Q6UXE8 466 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 LINC01560Q8TB33 94 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 SDSLQ96GA7 329 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 ABHD14BQ96IU4 210 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 GAFA1Q96PS6 74 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 DIRC2Q96SL1 478 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 BARX1Q9HBU1 254 aaPredicted RBP14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 PSG11Q9UQ72 335 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 RNF212BA8MTL3 300 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 E7EQL1 145 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 ST8SIA5O15466 376 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 IGKV1-5P01602 117 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 CD55P08174 381 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 TNFRSF1AP19438 455 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 CHRNB4P30926 498 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 GPR157Q5UAW9 335 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 UNQ6494/PRO21346Q6UXR6 183 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 Q6ZRM9 215 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 CCL13Q99616 98 aa14.42□□□□□ -0.1
PCDHGC3-205ENST00000617641 AKR1C2P52895 323 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 ID3Q02535 119 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 NHLH2Q02577 135 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 EIF4EBP1Q13541 118 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 LY6DQ14210 128 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 CR1LQ2VPA4 569 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 OR2B11Q5JQS5 317 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 FAM216BQ8N7L0 139 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 ZBTB34Q8NCN2 500 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 C14orf79Q96F83 325 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 WFDC1Q9HC57 220 aa14.41□□□□□ -0.1
PCDHGC3-205ENST00000617641 RELNP78509 3460 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms