RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 GPX7Q96SL4 187 aaPredicted RBP11.74□□□□□ -0.53
PPP4R3B-205ENST00000616288 C19orf25Q9UFG5 118 aaPredicted RBP11.74□□□□□ -0.53
PPP4R3B-205ENST00000616288 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
PPP4R3B-205ENST00000616288 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 HTR1DP28221 377 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 ZNF77Q15935 545 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 MRPL21Q7Z2W9 205 aaKnown RBP11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 GATAD1Q8WUU5 269 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 TWSG1Q9GZX9 223 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 CLEC5AQ9NY25 188 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 PLXND1Q9Y4D7 1925 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 K7EQM0 130 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 HYPMO75409 117 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 CA2P00918 260 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 TNFP01375 233 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR10J4P0C629 311 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 SPINK2P20155 84 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 Q6ZWC4 215 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR1N2Q8NGR9 330 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR1L3Q8NH93 324 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 ABI3Q9P2A4 366 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 SLC17A4Q9Y2C5 497 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 IGKV1D-8A0A087WSZ0 117 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR2T8A6NH00 312 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 H3BUT2 72 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 PLPP3O14495 311 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 ZNF217O75362 1048 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 CATR1Q13166 79 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 FDX2Q6P4F2 183 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 TMEM147Q9BVK8 224 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 MYO16Q9Y6X6 1858 aa11.73□□□□□ -0.53
PPP4R3B-205ENST00000616288 IGKV1D-42A0A075B6H8 117 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR5B21A6NL26 309 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 PDCD6O75340 191 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 MFAP2P55001 183 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 RAB35Q15286 201 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 PRSS8Q16651 343 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 VASH2Q86V25 355 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR10W1Q8NGF6 305 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 HIST1H1EP10412 219 aaKnown RBP11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 IGFBP3P17936 291 aaPredicted RBP11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 MAS1LP35410 378 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 ERVK-16P61578 105 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 MYBPHQ13203 477 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 MMD2Q8IY49 270 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR5AS1Q8N127 324 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 WDR54Q9H977 334 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 PSG2P11465 335 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 FABP2P12104 132 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 UBE2G1P62253 170 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 C9orf135Q5VTT2 229 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.72□□□□□ -0.534e-7■■■■□ 21.6
PPP4R3B-205ENST00000616288 OR4D5Q8NGN0 318 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 LILRA1O75019 489 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 DHRS3O75911 302 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 LYPD3O95274 346 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 BGLAPP02818 100 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 TMEM56Q96MV1 263 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 AICDAQ9GZX7 198 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 TAAR3PQ9P1P4 343 aa11.72□□□□□ -0.53
PPP4R3B-205ENST00000616288 TEX50A0A1B0GTY4 177 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 PROB1E7EW31 1015 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 GPR27Q9NS67 375 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 PARP14Q460N5 1801 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 IGLV1-36A0A0B4J1U3 117 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 SRSF10O75494 262 aaKnown RBP11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 ISG15P05161 165 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 VSTM2LQ96N03 204 aa11.71□□□□□ -0.53
PPP4R3B-205ENST00000616288 OR4C46A6NHA9 309 aa11.71□□□□□ -0.54
PPP4R3B-205ENST00000616288 PRRT4C9JH25 899 aa11.71□□□□□ -0.54
PPP4R3B-205ENST00000616288 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.54
PPP4R3B-205ENST00000616288 FGF14Q92915 247 aa11.71□□□□□ -0.54
PPP4R3B-205ENST00000616288 CLDN23Q96B33 292 aa11.71□□□□□ -0.54
PPP4R3B-205ENST00000616288 A0A0A6YYD4 124 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 ACSF3Q4G176 576 aaPredicted RBP11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 SSMEM1Q8WWF3 244 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 MAP1LC3CQ9BXW4 147 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 LIN7CQ9NUP9 197 aaKnown RBP11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 ZNF319Q9P2F9 582 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 SELENOHQ8IZQ5 122 aaKnown RBP11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
PPP4R3B-205ENST00000616288 IGHV2OR16-5A0A0B4J2B6 119 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms