RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	SRD5A2	P31213	254 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	TNFRSF9	Q07011	255 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	RAB30	Q15771	203 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	FAM180A	Q6UWF9	173 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	MRPL41	Q8IXM3	137 aa	Known RBP	11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	GBGT1	Q8N5D6	347 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	PSMF1	Q92530	271 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	IMMP1L	Q96LU5	166 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM68	Q96MH6	324 aa		11.68	□□□□□ -0.54
UBE2F-223	ENST00000612130	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	GYPA	P02724	150 aa		11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	FGF5	P12034	268 aa		11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM14EP	Q6UXP3	125 aa		11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	CPEB3	Q8NE35	698 aa	Known RBP	11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	EML6	Q6ZMW3	1958 aa		11.67	□□□□□ -0.54
UBE2F-223	ENST00000612130	KIR2DL5B	A0A0G2JN68	375 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	KIR2DL5B	A0A0G2JPC4	375 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGHV5-10-1	A0A0J9YXX1	117 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	COX6A1	P12074	109 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	CNN1	P51911	297 aa	Known RBP	11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	RTP5	Q14D33	572 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	ATP6V1F	Q16864	119 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	SPANXN5	Q5MJ07	72 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	C20orf204	Q6ZNR8	217 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	MOB1B	Q7L9L4	216 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	MRPL21	Q7Z2W9	205 aa	Known RBP	11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	KIR2DL5A	Q8N109	375 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM37	Q8WXS4	190 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130		A0A1B0GWJ7	208 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130		M0R143	59 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	CXCL13	O43927	109 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	IGLV2-14	P01704	120 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR4A8	P0C604	315 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	CD99	P14209	185 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	ERVFC1-1	P60608	527 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	C1orf194	Q5T5A4	169 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	ACSM6	Q6P461	480 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	MRPL52	Q86TS9	123 aa	Known RBP	11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR5A2	Q8NGI9	324 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	NEIL1	Q96FI4	390 aa	Predicted RBP	11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	CCDC74B	Q96LY2	380 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	SNHG12	Q9BXW3	62 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130	SLC25A22	Q9H936	323 aa		11.66	□□□□□ -0.54
UBE2F-223	ENST00000612130		A0A1W2PQM1	296 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	ZNF585B	Q52M93	769 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR4F5	Q8NH21	305 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM45B	Q96B21	275 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	OR4F4	Q96R69	305 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	IER2	Q9BTL4	223 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	TMEM147	Q9BVK8	224 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	PPP1R14D	Q9NXH3	145 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	CRIM1	Q9NZV1	1036 aa		11.65	□□□□□ -0.54
UBE2F-223	ENST00000612130	TRAV24	A0A0B4J272	114 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	TMEM210	A6NLX4	147 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	SYNGR1	O43759	233 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	TESK1	Q15569	626 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	GUSBP11	Q6P575	273 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	TEX38	Q6PEX7	206 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR1K1	Q8NGR3	316 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	R3HDM4	Q96D70	268 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	IMMP2L	Q96T52	175 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	FKBP11	Q9NYL4	201 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR1A1	Q9P1Q5	309 aa		11.65	□□□□□ -0.55
UBE2F-223	ENST00000612130	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	MLNR	O43193	412 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	SS18L1	O75177	396 aa	Predicted RBP	11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	UMOD	P07911	640 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	COX5B	P10606	129 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	RAB4A	P20338	218 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	MLF1	P58340	268 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	GNB2	P62879	340 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	CCL7	P80098	99 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	YRDC	Q86U90	279 aa	Known RBP	11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	RPS19BP1	Q86WX3	136 aa	Known RBP	11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR10G9	Q8NGN4	311 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR10G7	Q8NGN6	311 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR10D3	Q8NH80	312 aa		11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.64	□□□□□ -0.55
UBE2F-223	ENST00000612130	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	RNF212B	A8MTL3	300 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	CLDN1	O95832	211 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	SRF	P11831	508 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	COX5A	P20674	150 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	RPL15	P61313	204 aa	Known RBP	11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	OR8G2P	Q6IF36	304 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	IL1F10	Q8WWZ1	152 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	RDH5	Q92781	318 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	RYDEN	Q9NUL5	291 aa	Known RBP	11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	DLL3	Q9NYJ7	618 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	HSPB7	Q9UBY9	170 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	PPP1R3C	Q9UQK1	317 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	HS3ST1	O14792	307 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	IL3RA	P26951	378 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	TDGF1P3	P51864	188 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	PPP1CB	P62140	327 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	TMEM144	Q7Z5S9	345 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	ZNF573	Q86YE8	665 aa		11.63	□□□□□ -0.55
UBE2F-223	ENST00000612130	ABCA7	Q8IZY2	2146 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms