RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MPTX1A8MV57 137 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 YPEL1O60688 119 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 RNF224P0DH78 156 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 F2RP25116 425 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 LOXL3P58215 753 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 LTC4SQ16873 150 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 TCF23Q7RTU1 214 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 ZNF645Q8N7E2 425 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 ZBTB34Q8NCN2 500 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 PPP1R1CQ8WVI7 109 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 C18orf12Q96KH6 178 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 YPEL2Q96QA6 119 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 LINC00574Q9H8X3 128 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 ZNF462Q96JM2 2506 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 ZNF729A6NN14 1252 aaPredicted RBP17.86■□□□□ 0.45
USP6NL-204ENST00000606752 FCN3O75636 299 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 B3GALNT1O75752 331 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 WNT2P09544 360 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 MORN2Q502X0 79 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 DRAM1Q8N682 238 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 FAM216AQ8WUB2 273 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 EDARADDQ8WWZ3 215 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 OR10C1Q96KK4 312 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 C2orf50Q96LR7 162 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 CTSZQ9UBR2 303 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 RNF150Q9ULK6 438 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 LINC00312Q9Y6C7 94 aa17.86■□□□□ 0.45
USP6NL-204ENST00000606752 DOPEY1Q5JWR5 2465 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 TRAV14DV4A0A0A6YYC5 116 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 H0Y980 276 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 DVL1O14640 695 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 SNAPC5O75971 98 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 IGHV2-70P01814 119 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 RPL31P62899 125 aaKnown RBP17.85■□□□□ 0.45
USP6NL-204ENST00000606752 MSMO1Q15800 293 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 GGNBP1Q5YKI7 109 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 TMEM56Q96MV1 263 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 OR2D2Q9H210 308 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 TAS2R3Q9NYW6 316 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 TMEM56-RWDD3S4R434 201 aa17.85■□□□□ 0.45
USP6NL-204ENST00000606752 DAOP14920 347 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 OMGP23515 440 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 UCP1P25874 307 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 LYZL2Q7Z4W2 148 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 LHFPL5Q8TAF8 219 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 AGMATQ9BSE5 352 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 HMSDA8MTL9 139 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 CDS2O95674 445 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 LGALSLQ3ZCW2 172 aaPredicted RBP17.84■□□□□ 0.45
USP6NL-204ENST00000606752 C19orf12Q9NSK7 152 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 LPAR3Q9UBY5 353 aa17.84■□□□□ 0.45
USP6NL-204ENST00000606752 LY6HO94772 140 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM30BQ3MIR4 351 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 LRRC37A5PQ49AS3 106 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF695Q8IW36 515 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 OR51H1Q8NH63 302 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 SPOCK3Q9BQ16 436 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 PSG11Q9UQ72 335 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 TMED3Q9Y3Q3 217 aa17.83■□□□□ 0.44
USP6NL-204ENST00000606752 SPTAN1Q13813 2472 aaKnown RBP17.83■□□□□ 0.44
USP6NL-204ENST00000606752 FXYD6-FXYD2A0A087WZ82 144 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 PSMB6P28072 239 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 IL15RAQ13261 267 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM268Q5VZI3 342 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 C11orf87Q6NUJ2 197 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 GFOD1Q9NXC2 390 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 IDI2-AS1Q9NZ38 188 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 RNF212BA8MTL3 300 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 ITGB1BP1O14713 200 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 SLC25A4P12235 298 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 IAH1Q2TAA2 248 aaPredicted RBP17.82■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM200BQ69YZ2 307 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 SELENOHQ8IZQ5 122 aaKnown RBP17.82■□□□□ 0.44
USP6NL-204ENST00000606752 SLC35G3Q8N808 338 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 ZBTB8BQ8NAP8 495 aaPredicted RBP17.82■□□□□ 0.44
USP6NL-204ENST00000606752 OR52M1Q8NGK5 317 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 H1FXQ92522 213 aaKnown RBP17.82■□□□□ 0.44
USP6NL-204ENST00000606752 RAB1CQ92928 201 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 IL22RA2Q969J5 263 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 TIMD4Q96H15 378 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 GAL3ST2Q9H3Q3 398 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 GSKIPQ9P0R6 139 aa17.82■□□□□ 0.44
USP6NL-204ENST00000606752 RALYQ9UKM9 306 aaKnown RBP17.82■□□□□ 0.44
USP6NL-204ENST00000606752 HRNRQ86YZ3 2850 aaPredicted RBP17.81■□□□□ 0.44
USP6NL-204ENST00000606752 DSCAML1Q8TD84 2053 aa17.81■□□□□ 0.44
USP6NL-204ENST00000606752 ST8SIA5O15466 376 aa17.81■□□□□ 0.44
USP6NL-204ENST00000606752 MPC2O95563 127 aa17.81■□□□□ 0.44
USP6NL-204ENST00000606752 ZNF273Q14593 569 aa17.81■□□□□ 0.44
USP6NL-204ENST00000606752 TMEM65Q6PI78 240 aa17.81■□□□□ 0.44
USP6NL-204ENST00000606752 PIGBOS1A0A0B4J2F0 54 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 DUXBA0A1W2PPF3 345 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 SERPINE2P07093 398 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 CDKN1AP38936 164 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 IFITM2Q01629 132 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 AVPI1Q5T686 147 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 OR10A7Q8NGE5 316 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 THAP6Q8TBB0 222 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 RBPMSQ93062 196 aaKnown RBP17.8■□□□□ 0.44
USP6NL-204ENST00000606752 ABHD14BQ96IU4 210 aa17.8■□□□□ 0.44
USP6NL-204ENST00000606752 PLEKHF2Q9H8W4 249 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms