RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 Q8N6K4 173 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 OR2T6Q8NHC8 308 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 SGMS2Q8NHU3 365 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 LGALS14Q8TCE9 139 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 RAB3CQ96E17 227 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 CMSS1Q9BQ75 279 aaKnown RBP12.55□□□□□ -0.4
RPS28-203ENST00000600659 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 IFI27L2Q9H2X8 130 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 DAPK2Q9UIK4 370 aa12.55□□□□□ -0.4
RPS28-203ENST00000600659 ELF5Q9UKW6 265 aaPredicted RBP12.55□□□□□ -0.4
RPS28-203ENST00000600659 IGHV3-72A0A0B4J1Y9 119 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 SH2D7A6NKC9 451 aaPredicted RBP12.54□□□□□ -0.4
RPS28-203ENST00000600659 ZNF736B4DX44 427 aaPredicted RBP12.54□□□□□ -0.4
RPS28-203ENST00000600659 GAPDHP04406 335 aaKnown RBP12.54□□□□□ -0.4
RPS28-203ENST00000600659 SCTP09683 121 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 OR5H6Q8NGV6 325 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 CAPSLQ8WWF8 208 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 GALMQ96C23 342 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 SLC25A38Q96DW6 304 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 PRSS22Q9GZN4 317 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
RPS28-203ENST00000600659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPS28-203ENST00000600659 OR1A1Q9P1Q5 309 aa12.54□□□□□ -0.4
RPS28-203ENST00000600659 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 FCGR3AP08637 254 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 SETD6Q8TBK2 473 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 IL1F10Q8WWZ1 152 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 ZNF251Q9BRH9 671 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 MOB4Q9Y3A3 225 aa12.53□□□□□ -0.4
RPS28-203ENST00000600659 SAA2-SAA4A0A096LPE2 208 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 LANCL1O43813 399 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 SAA2P0DJI9 122 aaPredicted RBP12.52□□□□□ -0.41
RPS28-203ENST00000600659 C11orf88Q6PI97 169 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 ZNF833PQ6ZTB9 187 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 C5orf56Q8N8D9 126 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 OR13F1Q8NGS4 319 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.41
RPS28-203ENST00000600659 AGMATQ9BSE5 352 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 ABRACLQ9P1F3 81 aa12.52□□□□□ -0.41
RPS28-203ENST00000600659 IGKV1D-8A0A087WSZ0 117 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ITGB1BP1O14713 200 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ST8SIA5O15466 376 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 TXNL1O43396 289 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 AIREO43918 545 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 TMEM11P17152 192 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 IL3RAP26951 378 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 OR3A3P47888 321 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 LSAMPQ13449 338 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ZNF260Q3ZCT1 412 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 MAFIPQ8WZ33 124 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 AKR1E2Q96JD6 320 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 NABP2Q9BQ15 211 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 CABLES2Q9BTV7 478 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 FUNDC2Q9BWH2 189 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 MRPL20Q9BYC9 149 aaKnown RBP12.51□□□□□ -0.41
RPS28-203ENST00000600659 TOLLIPQ9H0E2 274 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ATG5Q9H1Y0 275 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 VCX3AQ9NNX9 186 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 PLSCR3Q9NRY6 295 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 RHBDL2Q9NX52 303 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 SLC23A1Q9UHI7 598 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 ZNF230Q9UIE0 474 aaPredicted RBP12.51□□□□□ -0.41
RPS28-203ENST00000600659 MGAT4AQ9UM21 535 aa12.51□□□□□ -0.41
RPS28-203ENST00000600659 A0A075B6Q4 140 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 METTL21EPA6NDL7 271 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 FGF16O43320 207 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 PROP1O75360 226 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 RGS11O94810 467 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 LPLP06858 475 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 CD1BP29016 333 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 RPS19P39019 145 aaKnown RBP12.5□□□□□ -0.41
RPS28-203ENST00000600659 SCAND1P57086 179 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 LSM3P62310 102 aaKnown RBP12.5□□□□□ -0.41
RPS28-203ENST00000600659 HES1Q14469 280 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 HNF4GQ14541 408 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 Q6ZS49 121 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 OR2AK2Q8NG84 335 aa12.5□□□□□ -0.41
RPS28-203ENST00000600659 C11orf54Q9H0W9 315 aaPredicted RBP12.5□□□□□ -0.41
RPS28-203ENST00000600659 PLXNB1O43157 2135 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 ADARB2-AS1A8MUL3 147 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 TRDCB7Z8K6 153 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 FABP7O15540 132 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 CD3GP09693 182 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 GSTT2BP0CG30 244 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 VDAC2P45880 294 aaPredicted RBP12.49□□□□□ -0.41
RPS28-203ENST00000600659 NCS1P62166 190 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
RPS28-203ENST00000600659 IDNKQ5T6J7 187 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms