RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 RBMX2Q9Y388 322 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-222ENST00000600320 A0A0U1RQK1 487 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 MDFIC2A0A1B0GVS7 189 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 RBBP9O75884 186 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 DIRAS3O95661 229 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 PMP2P02689 132 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 SRD5A1P18405 259 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 PAX6P26367 422 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 PRRX1P54821 245 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 ARPC4P59998 168 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 Q3ZCU0 254 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 MIDNQ504T8 468 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 LY6G6FQ5SQ64 297 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 LINC00299Q6ZSB3 139 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 SLC25A48Q6ZT89 311 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 C9orf139Q6ZV77 190 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 H1FOOQ8IZA3 346 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 LINC00311Q8N616 119 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 OR5AP2Q8NGF4 316 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 SDHCQ99643 169 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 MMP28Q9H239 520 aa16.23■□□□□ 0.19
SHKBP1-222ENST00000600320 ST8SIA5O15466 376 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 NFYAP23511 347 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 BPIFB3P59826 476 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 CDK10Q15131 360 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 TUSC1Q2TAM9 212 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 DYNAPQ8N1N2 210 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 C8orf31Q8N9H6 132 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 OR10J5Q8NHC4 309 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 TRIM63Q969Q1 353 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 ZNF48Q96MX3 618 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 ABHD14AQ9BUJ0 271 aa16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 C11orf54Q9H0W9 315 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 NIPBLQ6KC79 2804 aaeCLIP16.22■□□□□ 0.19
SHKBP1-222ENST00000600320 BUB1B-PAK6H3BSN5 160 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 RGS11O94810 467 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 CTXN2P0C2S0 81 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 HTR1DP28221 377 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 HRH1P35367 487 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 LGALS4P56470 323 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 ACTBP60709 375 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 ACTG1P63261 375 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 DEFB112Q30KQ8 113 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 OR5H2Q8NGV7 314 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 SLC6A7Q99884 636 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 GINS4Q9BRT9 223 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 THAP7Q9BT49 309 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 NECAP2Q9NVZ3 263 aa16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 TBL2Q9Y4P3 447 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-222ENST00000600320 LY6LH3BQJ8 138 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 RFX2P48378 723 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 TAS2R46P59540 309 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF45Q02386 682 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 SSBP1Q04837 148 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 DIAPH2-AS1Q14236 149 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 MINOS1Q5TGZ0 78 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 OVCH2Q7RTZ1 564 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 LDLRAD3Q86YD5 345 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 ODF3L1Q8IXM7 274 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 Q8N402 240 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 TMEM229BQ8NBD8 167 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 OR2AK2Q8NG84 335 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 EHFQ9NZC4 300 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 DPM3Q9P2X0 92 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 MINOS1-NBL1R4GNA1 71 aa16.2■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF736B4DX44 427 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 J3QRK9 145 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 M0QYG6 137 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 ITGB1BP1O14713 200 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 TUSC2O75896 110 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 CD3DP04234 171 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 FAM157CP0CG43 387 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 OR5H8P0DN80 308 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 OR3A3P47888 321 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 BAK1Q16611 211 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 KRTAP21-3Q3LHN1 58 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 TPTE2P1Q5T6R2 138 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 LYG1Q8N1E2 194 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 OR10X1Q8NGY0 326 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 ABHD14BQ96IU4 210 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 AGMATQ9BSE5 352 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 TINAGL1Q9GZM7 467 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 RNF150Q9ULK6 438 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 HILPDAQ9Y5L2 63 aa16.19■□□□□ 0.18
SHKBP1-222ENST00000600320 NAV3Q8IVL0 2385 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 CD74P04233 296 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 AADACP22760 399 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 FCGR2CP31995 323 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 TAS2R19P59542 299 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 DYRK1AQ13627 763 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 SSX2Q16385 188 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 ZNF660Q6AZW8 331 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 GDPD1Q8N9F7 314 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 OR4D10Q8NGI6 311 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 EDARADDQ8WWZ3 215 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 ST6GALNAC6Q969X2 333 aa16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 AMMECR1Q9Y4X0 333 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-222ENST00000600320 IGKV1D-13A0A0B4J2D9 117 aa16.17■□□□□ 0.18
SHKBP1-222ENST00000600320 ANKRD20A5PA0PJZ0 165 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms