RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 SPANXN2Q5MJ10 180 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TEX38Q6PEX7 206 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 Q6ZNX1 250 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 OR2W3Q7Z3T1 314 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TGIF2LXQ8IUE1 241 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MRPL41Q8IXM3 137 aaKnown RBP9.05□□□□□ -0.96
HIF3A-217ENST00000600236 STPG2Q8N412 459 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 JAGN1Q8N5M9 183 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MINDY2Q8NBR6 621 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 KLHL30-AS1Q8NEE0 82 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 CCDC107Q8WV48 283 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 THRSPQ92748 146 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 MRPS24Q96EL2 167 aaKnown RBP9.05□□□□□ -0.96
HIF3A-217ENST00000600236 NOL4LQ96MY1 436 aaPredicted RBP9.05□□□□□ -0.96
HIF3A-217ENST00000600236 CCDC32Q9BV29 185 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 GNG12Q9UBI6 72 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 TRAPPC2LQ9UL33 140 aa9.05□□□□□ -0.96
HIF3A-217ENST00000600236 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
HIF3A-217ENST00000600236 C15orf65H3BRN8 121 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 CA11O75493 328 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 UPK1BO75841 260 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 IGFBP3P17936 291 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-217ENST00000600236 PTBP1P26599 531 aaKnown RBP eCLIP9.04□□□□□ -0.96
HIF3A-217ENST00000600236 CD1BP29016 333 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 REG1BP48304 166 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 THBS3P49746 956 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 MXD1Q05195 221 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 INSL4Q14641 139 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 PNLIPRP3Q17RR3 467 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 RGS21Q2M5E4 152 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 AWAT2Q6E213 333 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 GLIPR1L1Q6UWM5 242 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 ZNF497Q6ZNH5 498 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 CEACAM19Q7Z692 300 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 CDH26Q8IXH8 852 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 OR8H1Q8NGG4 311 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 OR13C5Q8NGS8 318 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
HIF3A-217ENST00000600236 RASL11BQ9BPW5 248 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 ETAA1Q9NY74 926 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
HIF3A-217ENST00000600236 V9GYH0 126 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 CMYA5Q8N3K9 4069 aa9.04□□□□□ -0.96
HIF3A-217ENST00000600236 NOTCH1P46531 2555 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 IGHV3-72A0A0B4J1Y9 119 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 FAM90A10PA6NDY2 464 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 FAM90A23PA8MXZ1 464 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 K7EIL1 84 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 MOSP00540 346 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 MT-ND4P03905 459 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 MAPK3P27361 379 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-217ENST00000600236 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
HIF3A-217ENST00000600236 GPR12P47775 334 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 IFITM3Q01628 133 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 CXorf66Q5JRM2 361 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-217ENST00000600236 VAX1Q5SQQ9 334 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 MZT2AQ6P582 158 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 NR2C2APQ86WQ0 139 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 LAX1Q8IWV1 398 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 NKAIN3Q8N8D7 197 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 RTN4IP1Q8WWV3 396 aaPredicted RBP9.03□□□□□ -0.96
HIF3A-217ENST00000600236 ORAI1Q96D31 301 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 SOSTQ9BQB4 213 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 ABCG5Q9H222 651 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 KCNIP1Q9NZI2 227 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 ZNF581Q9P0T4 197 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 RCC2Q9P258 522 aaKnown RBP9.03□□□□□ -0.96
HIF3A-217ENST00000600236 LINC00527Q9UJ94 153 aa9.03□□□□□ -0.96
HIF3A-217ENST00000600236 VWFP04275 2813 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 TRBV5-7A0A0A0MS05 114 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 A0A1W2PP11 408 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 C12orf77C9JDV5 145 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 MAS1P04201 325 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 GLAP06280 429 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 OR5H8P0DN80 308 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 VDAC1P21796 283 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 HOXD3P31249 432 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-217ENST00000600236 OXA1LQ15070 435 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 HSD17B12Q53GQ0 312 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 FAM27D1Q5T7N8 215 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 RAB12Q6IQ22 244 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 ETV3LQ6ZN32 361 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
HIF3A-217ENST00000600236 LYSMD2Q8IV50 215 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 PRR18Q8N4B5 295 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 Q8N6K4 173 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 OR8U1Q8NH10 309 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 OR4K15Q8NH41 348 aa9.02□□□□□ -0.97
HIF3A-217ENST00000600236 UBALD1Q8TB05 177 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms