RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 NKX6-2Q9C056 277 aaPredicted RBP18.14■□□□□ 0.49
GRAMD1A-212ENST00000600231 MEX3AA1L020 520 aaKnown RBP18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 IFNL4K9M1U5 179 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 KRTCAP3Q53RY4 240 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 KRBOX4Q5JUW0 171 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 VHLLQ6RSH7 139 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 CD177Q8N6Q3 437 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 KIAA1324LA8MWY0 1029 aaPredicted RBP18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 MKRN2OSH3BPM6 223 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 IGKV1-5P01602 117 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 EGR1P18146 543 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 CEACAM8P31997 349 aaPredicted RBP18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 TMEM217Q8N7C4 229 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 OR5C1Q8NGR4 320 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 FAM57AQ8TBR7 257 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 ABHD17AQ96GS6 310 aa18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 LIN7CQ9NUP9 197 aaKnown RBP18.13■□□□□ 0.49
GRAMD1A-212ENST00000600231 PIGBOS1A0A0B4J2F0 54 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 SLC25A6P12236 298 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 MMP9P14780 707 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 FAM27E3Q08E93 113 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 SPRNQ5BIV9 151 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 C10orf91Q5T1B1 145 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 FAM180AQ6UWF9 173 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 C22orf34Q6ZV56 151 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 PUSL1Q8N0Z8 303 aaKnown RBP18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 SFXN3Q9BWM7 321 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 CACNG5Q9UF02 275 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 CACFD1Q9UGQ2 172 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 RFNGQ9Y644 331 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 CUL9Q8IWT3 2517 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 PCNX1Q96RV3 2341 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 MZT1Q08AG7 82 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF266Q14584 549 aa18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 LSM10Q969L4 123 aaKnown RBP18.12■□□□□ 0.49
GRAMD1A-212ENST00000600231 LOC105371267A0A1B0GV96 52 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 RNASEK-C17orf49H0YIS7 233 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 DNASE2O00115 360 aaPredicted RBP18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 IGHV3-13P01766 116 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 SSTR5P35346 364 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 GLRXP35754 106 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 DYNLT3P51808 116 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 TAGLNQ01995 201 aaKnown RBP18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF616Q08AN1 781 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 SVBPQ8N300 66 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 OR13A1Q8NGR1 328 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 OR2D2Q9H210 308 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 CEP295Q9C0D2 2601 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 BMP5P22003 454 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 PRDX2P32119 198 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 CD200P41217 278 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 NKX6-1P78426 367 aaPredicted RBP18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF295-AS1Q8N0V1 137 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF645Q8N7E2 425 aa18.11■□□□□ 0.49
GRAMD1A-212ENST00000600231 FAM74A7A6NL05 159 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 H3BP45 60 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 F12P00748 615 aaPredicted RBP18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 CD5P06127 495 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 CD80P33681 288 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 FAM74A3Q4VXF1 159 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 MIDNQ504T8 468 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 C5orf30Q96GV9 206 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 CARHSP1Q9Y2V2 147 aaKnown RBP18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 MED19A0JLT2 244 aaPredicted RBP18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 A8MXE2 369 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 SRRM5B3KS81 715 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 PRH1P02810 166 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 PPP1CCP36873 323 aaKnown RBP18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 CAMLGP49069 296 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 KLF3P57682 345 aaPredicted RBP18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 SPAG16Q8N0X2 631 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 RFESDQ8TAC1 157 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 OR2V2Q96R30 315 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 DCTN5Q9BTE1 182 aa18.1■□□□□ 0.49
GRAMD1A-212ENST00000600231 C9JQL5 133 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 TSPAN15O95858 294 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 ATP6V0CP27449 155 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 TMEM182Q6ZP80 229 aaPredicted RBP18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF808Q8N4W9 903 aaPredicted RBP18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 NINJ1Q92982 152 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 SEC11CQ9BY50 192 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 IGKV1D-17A0A075B6S4 117 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 ATP6V1G2-DDX39BF2Z307 99 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 BAXQ07812 192 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 EDDM3AQ14507 147 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 GCSAMQ8N6F7 178 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 TP53TG5Q9Y2B4 290 aa18.09■□□□□ 0.49
GRAMD1A-212ENST00000600231 ZNF737O75373 536 aa18.08■□□□□ 0.49
GRAMD1A-212ENST00000600231 TOLLIPQ9H0E2 274 aa18.08■□□□□ 0.49
GRAMD1A-212ENST00000600231 IGHV3-43A0A0B4J1X8 118 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 SPRY3O43610 288 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 RAMP3O60896 148 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 IGHV3-43DP0DP04 118 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 RAB5CP51148 216 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 RPL30P62888 115 aaKnown RBP18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 C3orf36Q3SXR2 165 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 FGFRL1Q8N441 504 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 LURAP1Q96LR2 239 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 C19orf12Q9NSK7 152 aa18.08■□□□□ 0.48
GRAMD1A-212ENST00000600231 OR2G3Q8NGZ4 309 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms