RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 LIPFP07098 398 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 CTXN2P0C2S0 81 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV3-43DP0DP04 118 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 NFYAP23511 347 aaPredicted RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 FPR2P25090 351 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 CEACAM6P40199 344 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 OR3A3P47888 321 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 INPP1P49441 399 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 DLX1P56177 255 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 ARPC4P59998 168 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 HILS1P60008 231 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 GNMTQ14749 295 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 MEF2DQ14814 521 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 LTC4SQ16873 150 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 ACTBL2Q562R1 376 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 RNASE10Q5GAN6 216 aaKnown RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 LDLRAD3Q86YD5 345 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 H1FOOQ8IZA3 346 aaPredicted RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 DEDD2Q8WXF8 326 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 MRGPRFQ96AM1 343 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 GALMQ96C23 342 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 C7orf50Q9BRJ6 194 aaKnown RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 PARP12Q9H0J9 701 aaKnown RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 GAL3ST2Q9H3Q3 398 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 EHFQ9NZC4 300 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 SLC23A1Q9UHI7 598 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
TRIM28-208ENST00000597172 DYNC2H1Q8NCM8 4307 aaKnown RBP7.7□□□□□ -1.18
TRIM28-208ENST00000597172 NAP1L6A6NFF2 107 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 B4DSR2 109 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 M0R1W7 72 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ENSAO43768 121 aaKnown RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 TUSC2O75896 110 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV1-8P0DP01 117 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 MMP9P14780 707 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 AADACP22760 399 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 FCGR2CP31995 323 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 PPP1CCP36873 323 aaKnown RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 CCR6P51684 374 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF134P52741 427 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 DVL1P1P54792 670 aaPredicted RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 PRB3Q04118 309 aaPredicted RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 PAX8Q06710 450 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 SCGB2A2Q13296 93 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 MORN2Q502X0 79 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 PLA1AQ53H76 456 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 AADACL3Q5VUY0 350 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF782Q6ZMW2 699 aaPredicted RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 C1orf122Q6ZSJ8 110 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 GLCCI1Q86VQ1 547 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 LHFPL1Q86WI0 220 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 LINC01356Q8N9X3 169 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 POC5Q8NA72 575 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR10A7Q8NGE5 316 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR10V1Q8NGI7 309 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR52M1Q8NGK5 317 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR13C8Q8NGS7 320 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR10J5Q8NHC4 309 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 LEAP2Q969E1 77 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 JMJD8Q96S16 334 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF2Q9BSG1 426 aaPredicted RBP7.69□□□□□ -1.18
TRIM28-208ENST00000597172 SIRPDQ9H106 197 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 OR2S2Q9NQN1 319 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 MCUBQ9NWR8 336 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 GFOD1Q9NXC2 390 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 RDH8Q9NYR8 311 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ONECUT1Q9UBC0 465 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 ARHGAP32A7KAX9 2087 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 DSCAML1Q8TD84 2053 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 RYR2Q92736 4967 aa7.69□□□□□ -1.18
TRIM28-208ENST00000597172 WNK2Q9Y3S1 2297 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 A0A087X0M5 115 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 IGKV1D-13A0A0B4J2D9 117 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1B0GX30 115 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 A0A1W2PPH5 198 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 FAM172BPA6NC97 362 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 OR5H14A6NHG9 310 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 CENPXA8MT69 81 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 DISC1C4P0D8 188 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 YPEL1O60688 119 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 IGHV3-7P01780 117 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 RBP4P02753 201 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 IFNA6P05013 189 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 MSMBP08118 114 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 IGKV1-13P0DP09 117 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 SPNP16150 400 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 ZBTB25P24278 435 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 NFYBP25208 207 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 SLC6A1P30531 599 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 FAUP35544 74 aaKnown RBP7.68□□□□□ -1.18
TRIM28-208ENST00000597172 TSPAN5P62079 268 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 KIAA2026Q5HYC2 2103 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 LY6G6FQ5SQ64 297 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 HCP5Q6MZN7 132 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 NRARPQ7Z6K4 114 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 ARRDC1Q8N5I2 433 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 KIR3DL3Q8N743 410 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 ZNF439Q8NDP4 499 aa7.68□□□□□ -1.18
TRIM28-208ENST00000597172 DUSP18Q8NEJ0 188 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms