RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
CLIP3-205ENST00000592017 PRKDCP78527 4128 aaKnown RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 IGHV1-3A0A0C4DH29 117 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 PEX14O75381 377 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 RGS11O94810 467 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 LPLP06858 475 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 CD3GP09693 182 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 GNB3P16520 340 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF134P52741 427 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 HTD2P86397 168 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 HNF4GQ14541 408 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 TIMM50Q3ZCQ8 353 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 MORN2Q502X0 79 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 C11orf88Q6PI97 169 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 Q6ZS46 218 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 TGIF2LXQ8IUE1 241 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 Q8N2B8 174 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 OR10R2Q8NGX6 335 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 LGALS14Q8TCE9 139 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 RTN4IP1Q8WWV3 396 aaPredicted RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 RBM14Q96PK6 669 aaKnown RBP11.12□□□□□ -0.63
CLIP3-205ENST00000592017 SERTAD4Q9NUC0 356 aa11.12□□□□□ -0.63
CLIP3-205ENST00000592017 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 HIST1H1DP16402 221 aaKnown RBP11.11□□□□□ -0.63
CLIP3-205ENST00000592017 LSM3P62310 102 aaKnown RBP11.11□□□□□ -0.63
CLIP3-205ENST00000592017 STEAP3Q658P3 488 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 OR2AK2Q8NG84 335 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 Q9N2K0 584 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 MGAT4AQ9UM21 535 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 KCNK7Q9Y2U2 307 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
CLIP3-205ENST00000592017 TRBV6-6A0A0A6YYG2 114 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 FAM90A9PA6NNJ1 464 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 RAB27BO00194 218 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 MFNGO00587 321 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 HSPA12AO43301 675 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 AIREO43918 545 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 YPEL1O60688 119 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 TGFBR1P36897 503 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 ARFRP1Q13795 201 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 C2orf68Q2NKX9 166 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 IDNKQ5T6J7 187 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 THNSL2Q86YJ6 484 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 MAFIPQ8WZ33 124 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 ST6GALNAC6Q969X2 333 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 YIPF6Q96EC8 236 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 YPEL2Q96QA6 119 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 TGP01266 2768 aa11.1□□□□□ -0.63
CLIP3-205ENST00000592017 TXNL1O43396 289 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 FCGR3AP08637 254 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 CSF1P09603 554 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 SCTP09683 121 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 ZNF137PP52743 207 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 IZUMO1Q8IYV9 350 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
CLIP3-205ENST00000592017 PTX4Q96A99 478 aa11.09□□□□□ -0.63
CLIP3-205ENST00000592017 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
CLIP3-205ENST00000592017 PARP12Q9H0J9 701 aaKnown RBP11.09□□□□□ -0.63
CLIP3-205ENST00000592017 SAA2-SAA4A0A096LPE2 208 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 NCBP2LA6PVI3 153 aaKnown RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 SERPINE3A8MV23 424 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF736B4DX44 427 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 M0QZK8 103 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 SAA2P0DJI9 122 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 ZBTB25P24278 435 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 TALDO1P37837 337 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 OR3A3P47888 321 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 OR2T10Q8NGZ9 312 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 EAF1Q96JC9 268 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 MRPL20Q9BYC9 149 aaKnown RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 IFI27L2Q9H2X8 130 aa11.08□□□□□ -0.64
CLIP3-205ENST00000592017 ZNF230Q9UIE0 474 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 ELF5Q9UKW6 265 aaPredicted RBP11.08□□□□□ -0.64
CLIP3-205ENST00000592017 TRIM64CA6NLI5 447 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 BET1O15155 118 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 FABP7O15540 132 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 LANCL1O43813 399 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 FBXO24O75426 580 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 AMY1AP04745 511 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 AMY2AP04746 511 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 SMIM18P0DKX4 95 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 CD28P10747 220 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 CD1BP29016 333 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 CEACAM6P40199 344 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 LSAMPQ13449 338 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 CDNFQ49AH0 187 aa11.07□□□□□ -0.64
CLIP3-205ENST00000592017 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms